| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16057 | 2:23,062,223-23,067,108 | - | C2H2g02169 | CX2g023988 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| C1H2g04094 | 2:23,067,864-23,069,433 | + | C2H2g26987 | - | - | - | - | Detail |
| C1H2g31349 | 2:23,085,107-23,089,465 | + | C2H2g18142 | CX2g019895 | LOC_Os02g40680 | Os02g0620200 | - | Detail |
| C1H2g24265 | 2:23,094,513-23,094,949 | + | C2H2g22522 | CX2g023588 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| C1H2g23096 | 2:23,101,444-23,102,940 | + | C2H2g07540 | CX2g024155 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| C1H2g17359 | 2:23,108,963-23,110,453 | + | C2H2g29061 | CX2g024932 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |
| C1H2g09682 | 2:23,127,316-23,134,783 | + | C2H2g25432 | CX2g022252 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| C1H2g19949 | 2:23,135,236-23,141,033 | - | C2H2g23211 | CX2g021587 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| C1H2g08472 | 2:23,141,722-23,142,237 | + | C2H2g09937 | - | LOC_Os02g40800 | Os02g0621400 | - | Detail |
| C1H2g27103 | 2:23,145,169-23,150,060 | - | C2H2g26983 | CX2g019928 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| C1H2g19112 | 2:23,156,268-23,157,103 | - | C2H2g10810 | CX2g022093 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| C1H2g19508 | 2:23,159,646-23,165,652 | + | C2H2g06529 | CX2g023876 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| C1H2g14578 | 2:23,167,307-23,172,147 | - | C2H2g19681 | CX2g021578 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| C1H2g29233 | 2:23,177,311-23,183,369 | + | C2H2g04248 | CX2g024826 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| C1H2g26754 | 2:23,187,758-23,189,168 | - | C2H2g00421 | CX2g020034 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| C1H2g28817 | 2:23,189,250-23,192,333 | + | C2H2g15374 | CX2g023937 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| C1H2g19529 | 2:23,193,333-23,196,120 | - | C2H2g11747 | CX2g019570 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| C1H2g10086 | 2:23,209,175-23,212,845 | + | C2H2g13801 | CX2g020385 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| C1H2g09216 | 2:23,243,978-23,255,851 | - | C2H2g23020 | CX2g021983 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| C1H2g23116 | 2:23,256,131-23,257,436 | + | - | - | - | Os06g0267200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24395 | 3:1,748,487-1,751,400 | - | C1H3g19390 | CX3g026091 | LOC_Os03g04400 | Os03g0136800 | - | Detail |
| C2H3g13274 | 3:1,752,584-1,759,549 | - | C1H3g26141 | CX3g026194 | LOC_Os03g04410 | Os03g0136900 | - | Detail |
| C2H3g10382 | 3:1,774,938-1,778,363 | + | C1H3g09324 | CX3g025161 | LOC_Os03g04430 | Os03g0137200 | - | Detail |
| C2H3g08269 | 3:1,779,390-1,782,550 | - | C1H3g24578 | CX3g030835 | LOC_Os03g04440 | Os03g0137300 | - | Detail |
| C2H3g22036 | 3:1,784,994-1,792,534 | + | C1H3g23115 | CX3g030190 | LOC_Os03g04450 | Os03g0137400 | - | Detail |
| C2H3g01834 | 3:1,793,297-1,794,844 | + | C1H3g17292 | CX3g030394 | LOC_Os03g04470 | Os03g0137600 | - | Detail |
| C2H3g03162 | 3:1,796,082-1,797,807 | - | C1H3g01548 | CX3g026460 | LOC_Os03g04480 | Os03g0137700 | - | Detail |
| C2H3g00922 | 3:1,809,074-1,811,975 | + | C1H3g28742 | CX3g029178 | LOC_Os03g04490 | Os03g0137800 | KRP5 | Detail |
| C2H3g19333 | 3:1,818,927-1,823,375 | + | C1H3g12595 | CX3g025982 | LOC_Os03g04500 | Os03g0138000 | - | Detail |
| C2H3g17338 | 3:1,824,798-1,834,066 | - | C1H3g07979 | - | - | - | - | Detail |
| C2H3g18481 | 3:1,836,993-1,838,564 | + | C1H3g03175 | CX3g028238 | LOC_Os03g04530 | Os03g0138200 | - | Detail |
| C2H3g15460 | 3:1,841,396-1,841,668 | + | C1H3g14282 | CX3g028187 | LOC_Os03g04545 | Os03g0138400 | - | Detail |
| C2H3g21651 | 3:1,846,877-1,848,368 | + | C1H3g10085 | CX3g026784 | LOC_Os03g04550 | Os03g0138500 | - | Detail |
| C2H3g00575 | 3:1,849,047-1,852,634 | - | C1H3g00368 | CX3g030039 | LOC_Os03g04560 | Os03g0138600 | - | Detail |
| C2H3g22416 | 3:1,855,154-1,859,762 | - | C1H3g01644 | CX3g028744 | LOC_Os03g04570 | Os03g0138700 | OsPTR1 | Detail |
| C2H3g05285 | 3:1,863,560-1,864,601 | - | C1H3g10596 | CX3g025606 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| C2H3g08919 | 3:1,864,831-1,867,435 | + | C1H3g14228 | CX3g028323 | LOC_Os03g04580 | Os03g0138900 | - | Detail |
| C2H3g29903 | 3:1,867,900-1,870,644 | + | C1H3g13763 | CX3g027627 | LOC_Os03g04590 | Os03g0139100 | - | Detail |
| C2H3g28589 | 3:1,870,795-1,875,643 | - | C1H3g21758 | CX3g030974 | LOC_Os03g04600 | Os03g0139200 | - | Detail |
| C2H3g22571 | 3:1,881,356-1,882,120 | + | C1H3g05378 | CX3g025022 | LOC_Os03g04610 | Os03g0139400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |