| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18264 | 2:22,785,429-22,788,083 | + | C2H2g20688 | CX2g024892 | LOC_Os02g40130 | Os02g0614966 | - | Detail |
| C1H2g30063 | 2:22,792,176-22,795,547 | + | C2H2g24104 | CX2g019718 | LOC_Os02g40180 | Os02g0615400 | - | Detail |
| C1H2g00311 | 2:22,809,258-22,809,955 | + | C2H10g03172 | - | - | - | - | Detail |
| C1H2g05371 | 2:22,812,589-22,816,778 | + | C2H2g27798 | CX2g023917 | LOC_Os02g40240 | Os02g0615800 | - | Detail |
| C1H2g28443 | 2:22,851,233-22,853,939 | - | - | - | - | - | - | Detail |
| C1H2g02395 | 2:22,891,925-22,893,245 | - | C2H2g08455 | CX2g020249 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| C1H2g19871 | 2:22,905,314-22,911,195 | - | C2H2g09185 | CX2g022448 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| C1H2g09487 | 2:22,917,792-22,922,311 | - | C2H2g01683 | - | LOC_Os02g40420 | - | - | Detail |
| C1H2g18153 | 2:22,923,517-22,936,773 | - | C2H2g12073 | CX2g019193 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| C1H2g29661 | 2:22,948,386-22,949,915 | + | C2H2g17921 | CX2g022735 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| C1H2g22026 | 2:22,950,572-22,959,121 | + | C2H2g21511 | CX2g022878 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| C1H2g23006 | 2:22,959,190-22,962,842 | - | C2H2g09254 | CX2g020956 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| C1H2g02429 | 2:22,963,406-22,971,975 | - | C2H2g18815 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C1H2g02028 | 2:22,988,335-22,988,934 | - | - | - | LOC_Os02g53020 | - | - | Detail |
| C1H2g22582 | 2:22,992,141-22,994,350 | + | C2H2g26929 | - | LOC_Os02g40490 | - | - | Detail |
| C1H2g02238 | 2:22,998,546-23,000,240 | + | C2H2g04756 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C1H2g04978 | 2:23,001,507-23,005,434 | + | C2H2g05107 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C1H2g16546 | 2:23,005,880-23,007,215 | - | C2H2g25708 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C1H2g01139 | 2:23,012,056-23,013,639 | - | C2H2g01262 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C1H2g19268 | 2:23,028,666-23,030,167 | + | C2H2g01838 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21547 | 12:17,182,235-17,184,541 | + | C1H12g13031 | CX12g018804 | LOC_Os12g33230 | Os12g0517100 | - | Detail |
| C2H12g24039 | 12:17,187,984-17,188,322 | + | C1H12g09087 | CX12g015986 | LOC_Os12g33240 | Os12g0517200 | - | Detail |
| C2H12g22503 | 12:17,190,403-17,193,133 | + | C1H12g10574 | CX12g017136 | LOC_Os12g33270 | Os12g0527500 | - | Detail |
| C2H12g23088 | 12:17,222,760-17,226,182 | - | - | CX12g017504 | - | - | - | Detail |
| C2H12g01589 | 12:17,240,359-17,243,088 | - | C1H12g21553 | CX12g017388 | LOC_Os12g33610 | Os12g0520200 | TAM1 | Detail |
| C2H12g04772 | 12:17,404,609-17,407,396 | + | C1H12g02841 | CX12g015046 | LOC_Os12g33300 | Os12g0518200 | OsDUF6 | Detail |
| C2H12g30450 | 12:17,422,282-17,425,728 | - | - | CX12g017504 | - | - | - | Detail |
| C2H12g14577 | 12:17,431,358-17,431,702 | - | C1H12g28875 | CX12g015524 | - | Os12g0480800 | - | Detail |
| C2H12g19127 | 12:17,436,113-17,438,851 | - | C1H12g21553 | CX12g017388 | LOC_Os12g33610 | Os12g0520200 | TAM1 | Detail |
| C2H12g00815 | 12:17,581,166-17,584,283 | + | C1H12g02841 | CX12g015046 | LOC_Os12g33300 | Os12g0518200 | OsDUF6 | Detail |
| C2H12g14610 | 12:17,589,660-17,589,899 | - | C1H4g27700 | - | LOC_Os08g17380 | Os01g0693532 | - | Detail |
| C2H12g23119 | 12:17,654,214-17,657,272 | + | C1H12g08829 | CX12g017792 | LOC_Os12g33270 | Os12g0527500 | - | Detail |
| C2H12g08279 | 12:17,665,688-17,671,772 | + | C1H12g23668 | CX12g016074 | LOC_Os12g34440 | Os12g0529200 | - | Detail |
| C2H12g18063 | 12:17,672,524-17,679,970 | - | C1H12g10121 | CX12g016434 | LOC_Os12g34330 | Os12g0527800 | - | Detail |
| C2H12g27770 | 12:17,680,517-17,682,152 | + | C1H12g16370 | CX12g017551 | LOC_Os12g34340 | Os12g0527900 | - | Detail |
| C2H12g02414 | 12:17,683,019-17,687,026 | - | C1H12g27316 | CX12g017098 | LOC_Os12g34350 | Os12g0528000 | - | Detail |
| C2H12g08556 | 12:17,693,492-17,695,957 | + | C1H12g03418 | CX12g018233 | LOC_Os12g34360 | Os12g0528100 | - | Detail |
| C2H12g08360 | 12:17,697,721-17,702,804 | + | C1H12g05978 | CX12g016339 | LOC_Os12g34370 | Os12g0528300 | - | Detail |
| C2H12g11104 | 12:17,703,208-17,707,998 | + | C1H12g25982 | CX12g017447 | LOC_Os12g34380 | Os12g0528400 | OsGS3 | Detail |
| C2H12g22976 | 12:17,709,263-17,711,784 | - | C1H12g23950 | CX12g017795 | - | Os12g0528801 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |