| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18264 | 2:22,785,429-22,788,083 | + | C2H2g20688 | CX2g024892 | LOC_Os02g40130 | Os02g0614966 | - | Detail |
| C1H2g30063 | 2:22,792,176-22,795,547 | + | C2H2g24104 | CX2g019718 | LOC_Os02g40180 | Os02g0615400 | - | Detail |
| C1H2g00311 | 2:22,809,258-22,809,955 | + | C2H10g03172 | - | - | - | - | Detail |
| C1H2g05371 | 2:22,812,589-22,816,778 | + | C2H2g27798 | CX2g023917 | LOC_Os02g40240 | Os02g0615800 | - | Detail |
| C1H2g28443 | 2:22,851,233-22,853,939 | - | - | - | - | - | - | Detail |
| C1H2g02395 | 2:22,891,925-22,893,245 | - | C2H2g08455 | CX2g020249 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| C1H2g19871 | 2:22,905,314-22,911,195 | - | C2H2g09185 | CX2g022448 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| C1H2g09487 | 2:22,917,792-22,922,311 | - | C2H2g01683 | - | LOC_Os02g40420 | - | - | Detail |
| C1H2g18153 | 2:22,923,517-22,936,773 | - | C2H2g12073 | CX2g019193 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| C1H2g29661 | 2:22,948,386-22,949,915 | + | C2H2g17921 | CX2g022735 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| C1H2g22026 | 2:22,950,572-22,959,121 | + | C2H2g21511 | CX2g022878 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| C1H2g23006 | 2:22,959,190-22,962,842 | - | C2H2g09254 | CX2g020956 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| C1H2g02429 | 2:22,963,406-22,971,975 | - | C2H2g18815 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C1H2g02028 | 2:22,988,335-22,988,934 | - | - | - | LOC_Os02g53020 | - | - | Detail |
| C1H2g22582 | 2:22,992,141-22,994,350 | + | C2H2g26929 | - | LOC_Os02g40490 | - | - | Detail |
| C1H2g02238 | 2:22,998,546-23,000,240 | + | C2H2g04756 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C1H2g04978 | 2:23,001,507-23,005,434 | + | C2H2g05107 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C1H2g16546 | 2:23,005,880-23,007,215 | - | C2H2g25708 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C1H2g01139 | 2:23,012,056-23,013,639 | - | C2H2g01262 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C1H2g19268 | 2:23,028,666-23,030,167 | + | C2H2g01838 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25740 | 1:26,694,748-26,699,145 | + | C1H1g23869 | CX1g004561 | LOC_Os01g52070 | Os01g0718700 | - | Detail |
| C2H1g24505 | 1:26,714,715-26,715,616 | + | C1H1g28082 | CX1g002233 | LOC_Os01g52100 | Os01g0719000 | - | Detail |
| C2H1g11421 | 1:26,717,894-26,723,523 | - | C1H1g06605 | CX1g000580 | LOC_Os01g52110 | Os01g0719100 | OsRZFP34, OsRFP1 | Detail |
| C2H1g16157 | 1:26,740,175-26,745,520 | + | C1H1g27416 | CX1g004024 | LOC_Os01g52130 | Os01g0719300 | OsSULTR3;6 | Detail |
| C2H1g04500 | 1:26,748,623-26,755,241 | + | C1H1g30372 | CX1g005204 | LOC_Os01g52140 | Os01g0719400 | - | Detail |
| C2H1g02109 | 1:26,759,341-26,761,366 | + | C1H1g18944 | CX1g003039 | LOC_Os01g52160 | Os01g0719600 | - | Detail |
| C2H1g21306 | 1:26,763,950-26,767,711 | + | C1H1g29948 | CX1g005692 | LOC_Os01g52170 | Os01g0719700 | - | Detail |
| C2H1g12535 | 1:26,769,527-26,770,882 | + | C1H1g29733 | CX1g006540 | LOC_Os01g52180 | Os01g0719900 | - | Detail |
| C2H1g22549 | 1:26,771,642-26,772,982 | - | C1H1g20732 | CX1g004595 | LOC_Os01g52190 | Os01g0720000 | - | Detail |
| C2H1g00582 | 1:26,775,109-26,775,414 | - | C1H1g20732 | CX1g000903 | LOC_Os01g52200 | Os01g0600000 | - | Detail |
| C2H1g08396 | 1:26,776,572-26,777,635 | - | C1H1g14278 | CX1g005572 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| C2H1g00446 | 1:26,778,657-26,779,109 | - | C1H1g29269 | CX1g005572 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| C2H1g27768 | 1:26,787,614-26,797,572 | - | C1H1g31092 | CX1g006085 | LOC_Os01g52250 | Os01g0720600 | SSIVA, OsSSIVa, SSIV-1 | Detail |
| C2H1g16044 | 1:26,803,711-26,807,926 | + | C1H1g09046 | CX1g006432 | LOC_Os01g52270 | Os01g0720800 | - | Detail |
| C2H1g14542 | 1:26,815,643-26,829,755 | + | C1H1g19609 | CX1g000877 | LOC_Os01g52380 | Os01g0721500 | - | Detail |
| C2H1g05952 | 1:26,831,267-26,832,757 | + | C1H1g19609 | CX1g000877 | LOC_Os01g52330 | Os01g0721500 | - | Detail |
| C2H1g03938 | 1:26,839,832-26,842,760 | - | C1H1g16429 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C2H1g29212 | 1:26,847,227-26,850,713 | + | C1H1g19540 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C2H1g15644 | 1:26,859,096-26,860,429 | + | C1H1g14417 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C2H1g14945 | 1:26,867,882-26,871,754 | + | C1H1g17552 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |