| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22126 | 1:10,055,937-10,058,869 | - | C2H1g15223 | - | LOC_Os01g19860 | - | - | Detail |
| C1H1g19979 | 1:10,092,420-10,098,291 | + | C2H1g20818 | CX1g002819 | LOC_Os01g19870 | Os01g0304300 | - | Detail |
| C1H1g14352 | 1:10,113,213-10,116,237 | + | C2H1g11426 | CX1g002390 | LOC_Os01g19940 | Os01g0305200 | - | Detail |
| C1H1g30123 | 1:10,135,115-10,135,381 | + | C2H1g02664 | CX1g004037 | LOC_Os01g19970 | Os01g0305900 | Os2R_MYB7 | Detail |
| C1H1g25851 | 1:10,141,032-10,141,979 | + | C2H1g18264 | CX1g004037 | LOC_Os01g19970 | Os01g0305900 | Os2R_MYB7 | Detail |
| C1H1g22584 | 1:10,149,744-10,150,563 | - | C2H1g03786 | CX1g003842 | LOC_Os01g19990 | Os01g0306100 | - | Detail |
| C1H1g06359 | 1:10,172,725-10,173,641 | + | C2H1g25465 | - | - | - | - | Detail |
| C1H1g06007 | 1:10,181,486-10,190,306 | + | C2H1g16908 | CX1g007219 | LOC_Os01g20110 | Os01g0306800 | - | Detail |
| C1H1g03989 | 1:10,196,755-10,201,815 | - | C2H1g17380 | CX1g002507 | LOC_Os01g20120 | Os01g0306900 | - | Detail |
| C1H1g25307 | 1:10,217,316-10,219,116 | - | C2H1g26747 | CX1g000991 | LOC_Os01g20160 | Os01g0307500 | SKC1, OsHKT1;5 | Detail |
| C1H1g06389 | 1:10,222,837-10,223,976 | - | C2H1g26747 | CX1g000991 | LOC_Os01g20160 | Os01g0307500 | SKC1, OsHKT1;5 | Detail |
| C1H1g23404 | 1:10,249,058-10,253,752 | - | C2H1g25693 | CX1g002251 | - | Os01g0307562 | - | Detail |
| C1H1g16008 | 1:10,258,489-10,259,471 | - | C2H1g30004 | CX1g001704 | LOC_Os01g20206 | Os01g0716500 | - | Detail |
| C1H1g27277 | 1:10,273,571-10,274,475 | + | - | CX1g004085 | - | Os10g0413101 | - | Detail |
| C1H1g09566 | 1:10,323,133-10,324,066 | + | C2H1g12164 | CX1g001078 | LOC_Os01g20830 | Os01g0309800 | - | Detail |
| C1H1g12067 | 1:10,325,896-10,326,435 | - | C2H1g25285 | - | - | Os12g0238400 | - | Detail |
| C1H1g13090 | 1:10,331,679-10,335,439 | + | C2H1g06659 | CX1g001846 | LOC_Os01g20840 | Os01g0309900 | - | Detail |
| C1H1g24589 | 1:10,337,316-10,347,355 | - | C2H1g26562 | CX1g001918 | LOC_Os01g20860 | Os01g0310100 | - | Detail |
| C1H1g24151 | 1:10,380,854-10,384,603 | + | C2H1g17166 | CX1g002504 | LOC_Os01g20880 | Os01g0310500 | - | Detail |
| C1H1g20174 | 1:10,392,477-10,395,242 | + | C2H1g21565 | CX1g002266 | LOC_Os01g20910 | Os01g0311100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g19073 | 9:15,635,940-15,636,245 | - | C1H9g13405 | CX9g055841 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g18629 | 9:15,645,202-15,646,614 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30510 | Os09g0482860 | - | Detail |
| C2H9g07652 | 9:15,652,256-15,652,732 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g29260 | 9:15,652,813-15,653,379 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g17054 | 9:15,660,942-15,661,916 | + | - | - | - | - | - | Detail |
| C2H9g17845 | 9:15,666,891-15,667,313 | + | C1H9g13668 | CX9g057607 | LOC_Os09g31025 | Os09g0483300 | - | Detail |
| C2H9g03683 | 9:15,669,227-15,669,756 | + | - | - | - | - | - | Detail |
| C2H9g03838 | 9:15,671,286-15,673,112 | - | C1H9g12952 | CX9g057792 | LOC_Os09g31050 | Os09g0483600 | - | Detail |
| C2H9g25938 | 9:15,688,650-15,695,073 | - | C1H9g10463 | CX9g055724 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| C2H9g09529 | 9:15,714,246-15,716,121 | + | C1H9g25716 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C2H9g06729 | 9:15,723,060-15,725,638 | + | C1H9g21552 | CX9g055844 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| C2H9g05554 | 9:15,744,629-15,749,440 | + | C1H9g28280 | CX9g057232 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| C2H9g12865 | 9:15,757,978-15,759,283 | + | C1H9g16686 | CX9g057421 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| C2H9g08271 | 9:15,759,761-15,761,485 | - | C1H9g09571 | CX9g056446 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| C2H9g29447 | 9:15,761,838-15,762,480 | - | - | CX9g057305 | - | Os09g0485950 | - | Detail |
| C2H9g15653 | 9:15,761,911-15,762,471 | + | C1H9g07652 | - | LOC_Os09g31190 | Os09g0486000 | - | Detail |
| C2H9g10052 | 9:15,766,622-15,767,116 | + | C1H9g10100 | CX9g058060 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| C2H9g09908 | 9:15,775,628-15,777,004 | + | C1H9g04466 | CX9g056228 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| C2H9g21283 | 9:15,784,041-15,784,806 | + | - | - | - | - | - | Detail |
| C2H9g06324 | 9:15,785,151-15,790,314 | - | C1H9g26143 | CX9g057251 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |