| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29428 | 2:21,616,247-21,616,886 | - | C2H2g12810 | CX2g021639 | LOC_Os02g37970 | Os02g0592833 | OsFLZ5 | Detail |
| C1H2g00636 | 2:21,624,924-21,631,609 | - | C2H2g28811 | CX2g022606 | LOC_Os02g38010 | Os02g0593100 | - | Detail |
| C1H2g16543 | 2:21,632,597-21,633,617 | - | C2H2g28811 | CX2g022606 | LOC_Os02g38010 | Os02g0593100 | - | Detail |
| C1H2g02941 | 2:21,639,488-21,642,330 | + | C2H2g02538 | CX2g020754 | LOC_Os02g38020 | Os02g0593500 | - | Detail |
| C1H2g00528 | 2:21,643,605-21,644,001 | - | C2H2g07587 | CX2g020428 | LOC_Os02g38029 | Os02g0593400 | - | Detail |
| C1H2g31252 | 2:21,646,462-21,648,754 | + | C2H2g02659 | CX2g021015 | LOC_Os02g38040 | Os02g0593600 | OsIRL2 | Detail |
| C1H2g28738 | 2:21,649,341-21,655,066 | - | C2H2g02107 | CX2g022113 | LOC_Os02g38050 | Os02g0593700 | - | Detail |
| C1H2g05228 | 2:21,658,897-21,663,795 | + | C2H2g27414 | CX2g022962 | LOC_Os02g38060 | Os02g0593900 | - | Detail |
| C1H2g19613 | 2:21,667,711-21,672,962 | + | C2H2g28617 | CX2g020918 | LOC_Os02g38080 | Os02g0594100 | - | Detail |
| C1H2g26025 | 2:21,700,250-21,703,122 | + | C2H2g22920 | CX2g022653 | LOC_Os02g38120 | Os02g0594700 | OsBTBN3 | Detail |
| C1H2g03331 | 2:21,719,495-21,721,656 | - | C2H2g27568 | CX2g023488 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| C1H2g17655 | 2:21,723,314-21,724,509 | - | C2H4g03036 | CX2g022047 | - | - | - | Detail |
| C1H2g12247 | 2:21,727,717-21,729,917 | - | C2H2g08333 | CX2g020733 | LOC_Os02g38160 | Os02g0594900 | - | Detail |
| C1H2g09203 | 2:21,740,378-21,743,864 | - | C2H2g24282 | CX2g024257 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| C1H2g18043 | 2:21,758,412-21,759,312 | - | C2H2g12684 | CX2g021227 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| C1H2g28766 | 2:21,763,335-21,767,182 | - | C2H2g27779 | CX2g023998 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| C1H2g15529 | 2:21,773,164-21,776,791 | + | C2H2g13918 | CX2g023123 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| C1H2g13753 | 2:21,777,995-21,779,681 | - | C2H2g12990 | CX2g024625 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| C1H2g12816 | 2:21,783,797-21,786,809 | - | C2H2g05640 | CX2g021096 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| C1H2g21293 | 2:21,788,801-21,797,902 | - | C2H2g05424 | CX2g020732 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g19920 | 5:1,071,223-1,078,065 | + | C1H5g13312 | CX5g040056 | LOC_Os05g03100 | Os05g0122400 | - | Detail |
| C2H5g29150 | 5:1,079,400-1,080,881 | - | C1H5g19743 | CX5g040504 | LOC_Os05g03110 | Os05g0122500 | - | Detail |
| C2H5g07853 | 5:1,090,734-1,091,740 | + | C1H6g16587 | CX5g039706 | LOC_Os01g26980 | - | - | Detail |
| C2H5g04039 | 5:1,100,012-1,104,960 | + | C1H5g02473 | CX5g037677 | LOC_Os05g03120 | Os05g0122600 | - | Detail |
| C2H5g14986 | 5:1,107,487-1,107,828 | - | C1H5g18506 | CX3g026690 | LOC_Os05g03130 | Os05g0122700 | - | Detail |
| C2H5g02194 | 5:1,117,091-1,120,390 | + | C1H5g28175 | CX5g039466 | LOC_Os05g03140 | Os05g0122800 | - | Detail |
| C2H5g07267 | 5:1,121,583-1,123,932 | - | C1H5g12318 | CX5g037843 | LOC_Os05g03150 | Os05g0122900 | OsBLE1 | Detail |
| C2H5g27198 | 5:1,128,660-1,129,085 | - | C1H5g28350 | CX5g040830 | LOC_Os05g03160 | Os05g0123000 | - | Detail |
| C2H5g14651 | 5:1,129,132-1,129,401 | - | C1H5g07212 | CX5g040717 | LOC_Os05g07270 | Os05g0417000 | - | Detail |
| C2H5g07168 | 5:1,141,860-1,142,991 | + | C1H5g30581 | CX5g041100 | LOC_Os05g03174 | Os05g0123100 | OsGT43A | Detail |
| C2H5g02369 | 5:1,145,426-1,147,282 | + | C1H5g28081 | CX5g041100 | LOC_Os05g03174 | Os05g0123100 | OsGT43A | Detail |
| C2H5g22807 | 5:1,154,020-1,157,888 | + | C1H5g23427 | CX5g039819 | LOC_Os05g03190 | Os05g0123200 | - | Detail |
| C2H5g07657 | 5:1,157,926-1,161,127 | - | C1H5g08812 | CX5g040457 | LOC_Os05g03200 | Os05g0123300 | - | Detail |
| C2H5g22124 | 5:1,163,104-1,164,610 | - | C1H5g19342 | CX5g036952 | - | Os05g0123400 | - | Detail |
| C2H5g13999 | 5:1,187,163-1,198,932 | - | C1H5g23275 | CX5g038760 | LOC_Os05g03320 | Os05g0124000 | - | Detail |
| C2H5g05422 | 5:1,203,643-1,206,728 | - | C1H5g11486 | - | - | - | - | Detail |
| C2H5g29581 | 5:1,211,230-1,215,128 | - | C1H5g22928 | CX5g038403 | LOC_Os05g03410 | Os05g0124800 | - | Detail |
| C2H5g09329 | 5:1,221,167-1,232,936 | + | C1H5g31600 | CX5g041143 | LOC_Os05g03430 | Os05g0125000 | SIZ1, OsSIZ1 | Detail |
| C2H5g04396 | 5:1,235,629-1,236,849 | + | - | - | - | - | - | Detail |
| C2H5g23356 | 5:1,249,907-1,253,535 | + | C1H5g10690 | CX5g036930 | LOC_Os05g03450 | Os05g0125200 | OsLecRK-VIII.2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |