| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29428 | 2:21,616,247-21,616,886 | - | C2H2g12810 | CX2g021639 | LOC_Os02g37970 | Os02g0592833 | OsFLZ5 | Detail |
| C1H2g00636 | 2:21,624,924-21,631,609 | - | C2H2g28811 | CX2g022606 | LOC_Os02g38010 | Os02g0593100 | - | Detail |
| C1H2g16543 | 2:21,632,597-21,633,617 | - | C2H2g28811 | CX2g022606 | LOC_Os02g38010 | Os02g0593100 | - | Detail |
| C1H2g02941 | 2:21,639,488-21,642,330 | + | C2H2g02538 | CX2g020754 | LOC_Os02g38020 | Os02g0593500 | - | Detail |
| C1H2g00528 | 2:21,643,605-21,644,001 | - | C2H2g07587 | CX2g020428 | LOC_Os02g38029 | Os02g0593400 | - | Detail |
| C1H2g31252 | 2:21,646,462-21,648,754 | + | C2H2g02659 | CX2g021015 | LOC_Os02g38040 | Os02g0593600 | OsIRL2 | Detail |
| C1H2g28738 | 2:21,649,341-21,655,066 | - | C2H2g02107 | CX2g022113 | LOC_Os02g38050 | Os02g0593700 | - | Detail |
| C1H2g05228 | 2:21,658,897-21,663,795 | + | C2H2g27414 | CX2g022962 | LOC_Os02g38060 | Os02g0593900 | - | Detail |
| C1H2g19613 | 2:21,667,711-21,672,962 | + | C2H2g28617 | CX2g020918 | LOC_Os02g38080 | Os02g0594100 | - | Detail |
| C1H2g26025 | 2:21,700,250-21,703,122 | + | C2H2g22920 | CX2g022653 | LOC_Os02g38120 | Os02g0594700 | OsBTBN3 | Detail |
| C1H2g03331 | 2:21,719,495-21,721,656 | - | C2H2g27568 | CX2g023488 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| C1H2g17655 | 2:21,723,314-21,724,509 | - | C2H4g03036 | CX2g022047 | - | - | - | Detail |
| C1H2g12247 | 2:21,727,717-21,729,917 | - | C2H2g08333 | CX2g020733 | LOC_Os02g38160 | Os02g0594900 | - | Detail |
| C1H2g09203 | 2:21,740,378-21,743,864 | - | C2H2g24282 | CX2g024257 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| C1H2g18043 | 2:21,758,412-21,759,312 | - | C2H2g12684 | CX2g021227 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| C1H2g28766 | 2:21,763,335-21,767,182 | - | C2H2g27779 | CX2g023998 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| C1H2g15529 | 2:21,773,164-21,776,791 | + | C2H2g13918 | CX2g023123 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| C1H2g13753 | 2:21,777,995-21,779,681 | - | C2H2g12990 | CX2g024625 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| C1H2g12816 | 2:21,783,797-21,786,809 | - | C2H2g05640 | CX2g021096 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| C1H2g21293 | 2:21,788,801-21,797,902 | - | C2H2g05424 | CX2g020732 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g02736 | 6:2,529,469-2,534,469 | + | C1H6g04308 | CX6g041513 | LOC_Os06g06770 | Os06g0163200 | - | Detail |
| C2H6g03282 | 6:2,538,769-2,542,140 | + | C1H6g18381 | CX6g045832 | LOC_Os06g06780 | Os06g0163300 | - | Detail |
| C2H6g27321 | 6:2,542,534-2,547,151 | + | C1H6g17692 | CX6g042498 | LOC_Os06g06790 | Os06g0163400 | - | Detail |
| C2H6g11880 | 6:2,548,268-2,556,728 | + | C1H6g04294 | CX6g041757 | LOC_Os06g06810 | Os06g0163500 | - | Detail |
| C2H6g17539 | 6:2,557,302-2,561,516 | - | C1H6g11950 | CX6g042556 | LOC_Os06g06820 | Os06g0163600 | - | Detail |
| C2H6g07092 | 6:2,581,967-2,582,615 | + | C1H6g04897 | - | - | - | - | Detail |
| C2H6g28033 | 6:2,586,702-2,591,795 | - | C1H6g25116 | CX6g045281 | LOC_Os06g06860 | Os06g0163900 | - | Detail |
| C2H6g16325 | 6:2,598,557-2,602,404 | - | C1H6g07484 | CX6g041288 | LOC_Os06g06860 | Os06g0163900 | - | Detail |
| C2H6g27105 | 6:2,610,939-2,614,665 | - | C1H6g17754 | CX6g045281 | LOC_Os06g06850 | Os06g0163701 | - | Detail |
| C2H6g19300 | 6:2,619,040-2,628,986 | - | C1H6g15154 | CX6g044665 | LOC_Os06g06870 | Os06g0164000 | - | Detail |
| C2H6g13584 | 6:2,632,512-2,635,386 | - | C1H6g16643 | CX6g043425 | LOC_Os06g06880 | Os06g0164100 | - | Detail |
| C2H6g17066 | 6:2,638,928-2,641,308 | + | C1H6g22631 | CX6g043164 | LOC_Os06g06900 | Os06g0164400 | SD6 | Detail |
| C2H6g15240 | 6:2,643,584-2,644,696 | + | C1H6g27522 | CX6g043763 | LOC_Os06g06910 | Os06g0164500 | - | Detail |
| C2H6g05978 | 6:2,645,914-2,646,259 | + | C1H6g27522 | - | - | Os06g0164600 | - | Detail |
| C2H6g27147 | 6:2,651,143-2,651,615 | + | C1H6g04079 | - | - | Os06g0164800 | - | Detail |
| C2H6g26148 | 6:2,652,337-2,654,796 | - | C1H6g26949 | CX6g043662 | LOC_Os06g06930 | Os06g0164900 | SDRLK-66 | Detail |
| C2H6g20187 | 6:2,660,893-2,662,265 | - | C1H6g21095 | CX6g041199 | LOC_Os06g06960 | Os06g0164900 | SDRLK-66 | Detail |
| C2H6g10099 | 6:2,669,320-2,671,734 | - | C1H6g20561 | CX6g042251 | LOC_Os06g06960 | Os06g0165500 | SDRLK-37 | Detail |
| C2H6g02227 | 6:2,675,466-2,676,714 | + | C1H6g08551 | CX6g042723 | - | Os06g0165800 | - | Detail |
| C2H6g29462 | 6:2,679,429-2,682,798 | - | C1H6g29634 | CX6g041346 | LOC_Os06g07000 | Os06g0166000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |