| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17458 | 2:21,442,607-21,443,914 | - | C2H2g25126 | CX2g024940 | LOC_Os02g37690 | Os02g0589400 | - | Detail |
| C1H2g25460 | 2:21,443,946-21,444,913 | - | C2H2g17757 | - | - | Os02g0589500 | - | Detail |
| C1H2g04990 | 2:21,457,119-21,458,919 | - | C2H2g20236 | - | LOC_Os02g37700 | Os02g0589700 | - | Detail |
| C1H2g28333 | 2:21,469,896-21,470,358 | - | C2H2g20437 | - | LOC_Os02g37760 | Os02g0590000 | - | Detail |
| C1H2g06135 | 2:21,474,065-21,474,801 | - | C2H2g20437 | - | LOC_Os02g37760 | Os02g0590400 | - | Detail |
| C1H2g04235 | 2:21,482,748-21,484,343 | - | C2H2g24202 | - | LOC_Os02g37770 | Os02g0590200 | - | Detail |
| C1H2g14085 | 2:21,492,865-21,495,741 | - | C2H2g10765 | - | LOC_Os02g37800 | Os02g0590400 | - | Detail |
| C1H2g07069 | 2:21,511,507-21,512,174 | + | C2H2g30011 | - | - | Os02g0590700 | - | Detail |
| C1H2g12411 | 2:21,513,999-21,518,182 | - | C2H2g09101 | CX2g022766 | LOC_Os02g37830 | Os02g0590800 | OsNek6 | Detail |
| C1H2g28871 | 2:21,544,033-21,547,018 | + | C2H2g15922 | CX2g019260 | LOC_Os02g37850 | Os02g0591500 | OSD1 | Detail |
| C1H2g00397 | 2:21,548,932-21,557,099 | - | C2H2g27397 | CX2g024590 | LOC_Os02g37856 | Os02g0591600 | - | Detail |
| C1H2g26007 | 2:21,559,243-21,560,869 | - | C2H2g11275 | CX2g019487 | LOC_Os02g37862 | Os02g0591700 | - | Detail |
| C1H2g30702 | 2:21,562,163-21,564,791 | - | C2H2g21804 | CX2g022457 | LOC_Os02g37870 | Os02g0591800 | - | Detail |
| C1H2g18118 | 2:21,570,064-21,575,084 | + | C2H2g01719 | CX2g024237 | LOC_Os02g37880 | Os02g0591900 | - | Detail |
| C1H2g15312 | 2:21,582,569-21,583,766 | - | C2H2g25613 | CX2g022275 | LOC_Os02g37890 | Os02g0592000 | - | Detail |
| C1H2g27123 | 2:21,584,724-21,589,240 | - | C2H2g24155 | CX2g023971 | LOC_Os02g37910 | Os02g0592200 | - | Detail |
| C1H2g00585 | 2:21,591,119-21,597,685 | - | C2H2g30097 | CX2g021962 | LOC_Os02g37920 | Os02g0592300 | OsPMS1 | Detail |
| C1H2g24188 | 2:21,601,589-21,603,934 | + | C2H2g19116 | CX2g018877 | LOC_Os02g37930 | Os02g0592400 | - | Detail |
| C1H2g18659 | 2:21,604,849-21,607,431 | - | C2H2g25858 | CX2g020482 | LOC_Os02g37940 | Os02g0592500 | - | Detail |
| C1H2g07685 | 2:21,607,559-21,612,221 | + | C2H2g03437 | CX2g019235 | LOC_Os02g37950 | Os02g0592600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09287 | 3:30,222,920-30,226,256 | + | C1H3g31065 | CX3g027455 | LOC_Os03g58070 | Os03g0794900 | - | Detail |
| C2H3g10350 | 3:30,226,916-30,232,292 | - | C1H3g14917 | CX3g025789 | LOC_Os03g58080 | Os03g0795000 | - | Detail |
| C2H3g14214 | 3:30,233,192-30,235,132 | - | C1H3g21726 | CX7g047050 | LOC_Os03g58090 | Os03g0795100 | - | Detail |
| C2H3g03262 | 3:30,245,918-30,247,592 | - | C1H3g19476 | CX3g026410 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| C2H3g27733 | 3:30,259,067-30,262,461 | + | C1H3g15891 | CX3g026673 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| C2H3g00892 | 3:30,262,622-30,262,816 | - | C1H3g05639 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g03004 | 3:30,263,080-30,264,677 | - | C1H3g08848 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g02014 | 3:30,266,840-30,269,177 | - | C1H3g16443 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C2H3g19484 | 3:30,269,440-30,272,649 | + | C1H3g00668 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g13882 | 3:30,280,144-30,280,849 | + | C1H3g17982 | - | - | Os03g0796000 | - | Detail |
| C2H3g08936 | 3:30,283,988-30,285,708 | + | C1H3g06155 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C2H3g19170 | 3:30,304,548-30,305,166 | - | C1H3g22799 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C2H3g21611 | 3:30,305,852-30,307,169 | - | C1H3g12446 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C2H3g18356 | 3:30,310,527-30,312,904 | - | C1H3g01827 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C2H3g26421 | 3:30,322,906-30,323,582 | - | - | CX7g047542 | - | - | - | Detail |
| C2H3g24067 | 3:30,325,529-30,328,397 | + | C1H3g31311 | CX3g026507 | - | - | - | Detail |
| C2H3g06838 | 3:30,342,946-30,345,210 | + | C1H3g10470 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C2H3g07985 | 3:30,356,260-30,362,517 | + | C1H3g27596 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C2H3g15466 | 3:30,362,875-30,367,218 | - | C1H3g15009 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C2H3g10564 | 3:30,370,146-30,373,999 | - | C1H3g17969 | CX3g025677 | LOC_Os03g58260 | Os03g0797000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |