| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g19932 | 2:20,518,073-20,518,918 | + | C2H2g24305 | CX2g024727 | LOC_Os02g36140 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g28979 | 2:20,522,221-20,523,846 | + | C2H2g13056 | CX2g024727 | LOC_Os02g36140 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g26519 | 2:20,524,474-20,525,935 | + | C2H2g03370 | CX2g024727 | LOC_Os02g36285 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g27996 | 2:20,529,855-20,532,739 | + | C2H2g08598 | CX2g019614 | LOC_Os02g36150 | Os02g0570500 | - | Detail |
| C1H2g01402 | 2:20,537,087-20,539,652 | - | C2H2g05039 | CX2g023226 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| C1H2g21986 | 2:20,545,967-20,550,189 | - | - | - | - | - | - | Detail |
| C1H2g07162 | 2:20,578,454-20,584,791 | + | C2H2g17098 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C1H2g08132 | 2:20,586,835-20,587,890 | - | - | - | - | - | - | Detail |
| C1H2g03952 | 2:20,589,022-20,599,159 | - | C2H2g07065 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C1H2g22902 | 2:20,617,446-20,619,066 | - | C2H2g07065 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C1H2g02826 | 2:20,619,508-20,625,671 | - | C2H2g09109 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C1H2g18768 | 2:20,639,765-20,641,079 | + | C2H2g16141 | CX2g024727 | LOC_Os02g36285 | Os02g0572050 | - | Detail |
| C1H2g17745 | 2:20,647,633-20,648,676 | - | C2H2g09753 | CX2g018873 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| C1H2g12070 | 2:20,650,475-20,651,894 | - | C2H2g01273 | - | - | Os02g0572300 | - | Detail |
| C1H2g26185 | 2:20,655,118-20,660,193 | - | C2H2g16620 | CX2g023356 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| C1H2g25932 | 2:20,677,538-20,679,197 | - | C2H2g00545 | CX2g023112 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| C1H2g10452 | 2:20,688,582-20,691,932 | - | C2H2g01996 | CX2g023654 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| C1H2g13546 | 2:20,709,852-20,713,652 | + | C2H2g05333 | CX2g018889 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |
| C1H2g14408 | 2:20,714,228-20,719,715 | - | C2H2g01642 | CX2g019460 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| C1H2g24873 | 2:20,720,518-20,724,732 | - | C2H2g30509 | CX2g024276 | LOC_Os02g36400 | Os02g0573400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00621 | 4:23,921,364-23,923,487 | + | C1H4g08480 | CX4g032521 | LOC_Os04g46860 | Os04g0555000 | OsHAM3 | Detail |
| C2H4g19260 | 4:23,942,331-23,945,860 | - | C1H4g10618 | CX4g032555 | LOC_Os04g46880 | Os04g0555300 | - | Detail |
| C2H4g01436 | 4:23,950,591-23,954,451 | + | C1H4g20955 | CX4g034039 | LOC_Os07g04850 | Os04g0555400 | - | Detail |
| C2H4g27783 | 4:23,954,678-23,974,658 | - | C1H4g31360 | CX4g033508 | LOC_Os04g46892 | Os04g0555600 | - | Detail |
| C2H4g05762 | 4:23,978,255-23,978,928 | - | C1H4g07997 | CX4g034295 | LOC_Os04g46910 | Os04g0555700 | - | Detail |
| C2H4g18497 | 4:23,980,201-23,982,503 | - | C1H4g10585 | CX4g034881 | LOC_Os04g46920 | Os04g0555800 | - | Detail |
| C2H4g06289 | 4:23,984,883-23,987,606 | - | C1H4g11489 | CX4g034263 | LOC_Os04g46930 | Os04g0555900 | - | Detail |
| C2H4g08766 | 4:23,990,648-23,996,462 | + | C1H4g03272 | CX4g036356 | LOC_Os04g46940 | Os04g0556000 | - | Detail |
| C2H4g05648 | 4:24,000,291-24,002,296 | + | C1H4g30189 | CX4g034227 | LOC_Os04g46960 | Os04g0556300 | - | Detail |
| C2H4g12448 | 4:24,004,533-24,008,120 | - | C1H4g14049 | CX4g035021 | LOC_Os04g47770 | Os04g0565400 | CZOGT3, OscZOGT3, cZOGT3 | Detail |
| C2H4g23162 | 4:24,016,477-24,017,883 | - | C1H4g14049 | CX4g033078 | LOC_Os04g46970 | Os04g0556400 | - | Detail |
| C2H4g24755 | 4:24,023,666-24,025,057 | - | C1H4g13088 | CX4g033570 | LOC_Os04g46980 | Os04g0556500 | CZOGT1, OscZOGT1, cZOGT1 | Detail |
| C2H4g02919 | 4:24,030,052-24,031,425 | - | C1H4g06970 | CX4g033013 | LOC_Os04g46990 | Os04g0556600 | CZOGT2, OscZOGT2, cZOGT2 | Detail |
| C2H4g05058 | 4:24,037,090-24,040,781 | - | C1H4g31399 | CX4g036272 | LOC_Os04g47010 | Os04g0556900 | - | Detail |
| C2H4g30487 | 4:24,041,948-24,044,482 | + | C1H4g30664 | CX4g035709 | LOC_Os04g47020 | Os04g0557000 | - | Detail |
| C2H4g19992 | 4:24,049,382-24,055,242 | - | C1H4g26258 | CX4g035060 | LOC_Os04g47040 | Os04g0557200 | - | Detail |
| C2H4g06728 | 4:24,065,735-24,069,226 | - | - | - | - | - | - | Detail |
| C2H4g05198 | 4:24,074,411-24,079,856 | - | C1H4g17780 | CX4g035060 | LOC_Os04g47059 | Os04g0557500 | Kala4, OSB2 | Detail |
| C2H4g28370 | 4:24,096,512-24,100,188 | - | C1H4g09612 | CX4g035414 | LOC_Os04g47080 | Os04g0557800 | - | Detail |
| C2H4g04058 | 4:24,110,395-24,111,729 | - | C1H4g23588 | CX4g031913 | LOC_Os04g47110 | Os04g0558200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |