| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g19932 | 2:20,518,073-20,518,918 | + | C2H2g24305 | CX2g024727 | LOC_Os02g36140 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g28979 | 2:20,522,221-20,523,846 | + | C2H2g13056 | CX2g024727 | LOC_Os02g36140 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g26519 | 2:20,524,474-20,525,935 | + | C2H2g03370 | CX2g024727 | LOC_Os02g36285 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g27996 | 2:20,529,855-20,532,739 | + | C2H2g08598 | CX2g019614 | LOC_Os02g36150 | Os02g0570500 | - | Detail |
| C1H2g01402 | 2:20,537,087-20,539,652 | - | C2H2g05039 | CX2g023226 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| C1H2g21986 | 2:20,545,967-20,550,189 | - | - | - | - | - | - | Detail |
| C1H2g07162 | 2:20,578,454-20,584,791 | + | C2H2g17098 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C1H2g08132 | 2:20,586,835-20,587,890 | - | - | - | - | - | - | Detail |
| C1H2g03952 | 2:20,589,022-20,599,159 | - | C2H2g07065 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C1H2g22902 | 2:20,617,446-20,619,066 | - | C2H2g07065 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C1H2g02826 | 2:20,619,508-20,625,671 | - | C2H2g09109 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C1H2g18768 | 2:20,639,765-20,641,079 | + | C2H2g16141 | CX2g024727 | LOC_Os02g36285 | Os02g0572050 | - | Detail |
| C1H2g17745 | 2:20,647,633-20,648,676 | - | C2H2g09753 | CX2g018873 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| C1H2g12070 | 2:20,650,475-20,651,894 | - | C2H2g01273 | - | - | Os02g0572300 | - | Detail |
| C1H2g26185 | 2:20,655,118-20,660,193 | - | C2H2g16620 | CX2g023356 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| C1H2g25932 | 2:20,677,538-20,679,197 | - | C2H2g00545 | CX2g023112 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| C1H2g10452 | 2:20,688,582-20,691,932 | - | C2H2g01996 | CX2g023654 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| C1H2g13546 | 2:20,709,852-20,713,652 | + | C2H2g05333 | CX2g018889 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |
| C1H2g14408 | 2:20,714,228-20,719,715 | - | C2H2g01642 | CX2g019460 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| C1H2g24873 | 2:20,720,518-20,724,732 | - | C2H2g30509 | CX2g024276 | LOC_Os02g36400 | Os02g0573400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g10162 | 6:24,770,592-24,770,939 | - | C1H6g18418 | CX6g042294 | LOC_Os06g46390 | Os06g0677600 | - | Detail |
| C2H6g18268 | 6:24,772,687-24,777,744 | + | C1H6g07635 | CX6g042249 | LOC_Os06g46400 | Os06g0677700 | - | Detail |
| C2H6g18312 | 6:24,779,841-24,786,012 | - | C1H6g07372 | CX6g043778 | LOC_Os06g46410 | Os06g0677800 | OsARF17 | Detail |
| C2H6g19101 | 6:24,806,557-24,807,807 | + | C1H6g28341 | CX6g045136 | LOC_Os06g46440 | Os06g0678100 | - | Detail |
| C2H6g22903 | 6:24,808,039-24,813,185 | - | C1H6g28764 | CX6g043297 | LOC_Os06g46450 | Os06g0678200 | OsSPS1 | Detail |
| C2H6g14411 | 6:24,827,512-24,833,478 | - | C1H6g09244 | CX6g045884 | LOC_Os06g46475 | Os06g0678650 | - | Detail |
| C2H6g03321 | 6:24,835,887-24,845,784 | - | C1H6g03373 | CX6g045884 | LOC_Os02g06725 | - | - | Detail |
| C2H6g12298 | 6:24,846,676-24,852,104 | - | C1H6g30532 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| C2H6g04962 | 6:24,852,667-24,856,827 | - | C1H6g29289 | CX6g044487 | LOC_Os06g46500 | Os06g0678800 | - | Detail |
| C2H6g25501 | 6:24,867,427-24,867,871 | + | C1H6g08663 | CX10g009324 | - | - | - | Detail |
| C2H6g00139 | 6:24,873,337-24,875,474 | - | C1H6g05442 | CX6g045315 | LOC_Os06g46560 | Os06g0679400 | - | Detail |
| C2H6g04537 | 6:24,878,693-24,881,980 | + | C1H6g06002 | CX6g041450 | LOC_Os06g46570 | Os06g0679500 | - | Detail |
| C2H6g25589 | 6:24,884,010-24,888,145 | - | C1H6g10559 | CX6g042651 | LOC_Os06g46590 | Os06g0679700 | - | Detail |
| C2H6g11527 | 6:24,889,265-24,896,208 | + | C1H6g03127 | CX6g043258 | LOC_Os06g46600 | Os06g0679800 | - | Detail |
| C2H6g06369 | 6:24,952,239-24,958,102 | + | C1H6g04695 | CX6g041534 | LOC_Os06g46670 | Os06g0680500 | OsGLR6.12 | Detail |
| C2H6g07546 | 6:24,963,163-24,966,747 | + | C1H6g24034 | CX6g045818 | LOC_Os06g46680 | Os06g0680700 | - | Detail |
| C2H6g27209 | 6:24,971,787-24,975,592 | - | C1H6g15452 | CX6g045036 | LOC_Os06g46690 | - | - | Detail |
| C2H6g05863 | 6:24,976,709-24,980,074 | - | C1H6g22683 | CX6g042679 | LOC_Os06g46700 | Os06g0680900 | - | Detail |
| C2H6g06846 | 6:24,980,900-24,986,895 | - | C1H6g09232 | CX6g044098 | LOC_Os06g46730 | Os06g0681100 | - | Detail |
| C2H6g04311 | 6:24,989,550-24,990,507 | - | C1H6g21904 | CX6g041719 | LOC_Os06g46740 | Os06g0681200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |