| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g14094 | 2:20,288,259-20,291,056 | - | C2H2g05354 | CX2g021611 | LOC_Os02g35660 | Os02g0564700 | - | Detail |
| C1H2g29150 | 2:20,303,400-20,305,571 | - | C2H2g05418 | CX2g020663 | LOC_Os02g35690 | Os02g0565000 | - | Detail |
| C1H2g29731 | 2:20,310,067-20,311,234 | + | C2H2g13608 | CX2g019138 | LOC_Os02g35700 | Os02g0565100 | - | Detail |
| C1H2g18157 | 2:20,319,464-20,321,431 | - | C2H2g29068 | CX2g020892 | LOC_Os02g35720 | Os02g0565200 | - | Detail |
| C1H2g08838 | 2:20,328,712-20,331,796 | + | C2H2g29701 | CX2g020114 | LOC_Os02g35750 | Os02g0565400 | - | Detail |
| C1H2g01184 | 2:20,332,178-20,334,014 | - | C2H2g00307 | CX2g020816 | LOC_Os02g35760 | Os02g0565500 | - | Detail |
| C1H2g26447 | 2:20,343,643-20,345,603 | - | C2H2g11368 | CX2g023962 | LOC_Os02g35770 | Os02g0565600 | - | Detail |
| C1H2g22635 | 2:20,364,007-20,367,020 | + | C2H2g01236 | CX2g023721 | LOC_Os02g35830 | Os02g0566400 | - | Detail |
| C1H2g20936 | 2:20,367,488-20,371,064 | - | C2H2g17118 | CX2g020597 | LOC_Os02g35840 | Os02g0566500 | - | Detail |
| C1H2g18346 | 2:20,380,446-20,384,212 | + | C2H2g10396 | CX2g019657 | LOC_Os02g35860 | Os02g0566700 | - | Detail |
| C1H2g31202 | 2:20,385,103-20,390,301 | - | C2H2g21221 | CX2g023157 | LOC_Os02g35870 | Os02g0566800 | - | Detail |
| C1H2g04600 | 2:20,394,766-20,396,602 | - | C2H2g06664 | CX2g019432 | LOC_Os02g35880 | Os02g0566900 | - | Detail |
| C1H2g02801 | 2:20,398,059-20,399,175 | - | C2H2g11173 | CX2g019739 | LOC_Os02g35890 | Os02g0567000 | - | Detail |
| C1H2g06102 | 2:20,400,872-20,403,937 | - | C2H2g20101 | CX2g020144 | - | - | - | Detail |
| C1H2g22051 | 2:20,404,984-20,407,382 | - | C2H2g12586 | CX2g020262 | LOC_Os02g35900 | Os02g0567100 | - | Detail |
| C1H2g28195 | 2:20,410,375-20,414,381 | - | C2H2g03033 | CX2g024581 | LOC_Os02g35910 | Os02g0567200 | - | Detail |
| C1H2g03936 | 2:20,429,664-20,435,140 | + | C2H2g11531 | CX2g019301 | LOC_Os02g35950 | Os02g0567900 | - | Detail |
| C1H2g08686 | 2:20,439,891-20,444,285 | - | C2H2g17720 | CX2g021378 | LOC_Os02g35970 | Os02g0568200 | CPT1 | Detail |
| C1H2g06762 | 2:20,454,409-20,455,038 | + | C2H2g29773 | CX2g018880 | LOC_Os02g36000 | Os02g0568600 | - | Detail |
| C1H2g26744 | 2:20,458,721-20,461,703 | - | C2H2g07658 | CX2g020624 | LOC_Os02g36020 | Os02g0568700 | OsKSL12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03359 | 3:5,792,932-5,793,630 | + | C1H3g23318 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C2H3g24748 | 3:5,794,954-5,802,619 | + | C1H3g17135 | CX3g030046 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| C2H3g09129 | 3:5,803,343-5,810,016 | + | C1H3g25680 | CX3g028144 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| C2H3g02566 | 3:5,811,449-5,816,438 | + | C1H3g10808 | CX3g025098 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| C2H3g16646 | 3:5,821,016-5,822,452 | + | C1H3g31142 | CX3g026072 | LOC_Os03g12500 | Os03g0225900 | - | Detail |
| C2H3g10692 | 3:5,829,270-5,830,121 | - | C1H3g02465 | CX3g026153 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| C2H3g15869 | 3:5,831,583-5,833,279 | + | C1H3g31559 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C2H3g08794 | 3:5,833,428-5,834,000 | + | C1H3g14266 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C2H3g29082 | 3:5,839,492-5,844,120 | + | C1H3g15877 | CX3g027606 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| C2H3g13286 | 3:5,850,353-5,857,091 | + | C1H3g27940 | CX3g025975 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| C2H3g30568 | 3:5,857,943-5,859,735 | - | C1H3g15687 | CX3g027982 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| C2H3g00790 | 3:5,860,981-5,866,764 | + | C1H3g18854 | CX3g024984 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| C2H3g22427 | 3:5,867,922-5,870,733 | + | C1H3g26728 | CX3g027871 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| C2H3g07335 | 3:5,873,669-5,881,089 | + | C1H3g26232 | CX3g030829 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| C2H3g16667 | 3:5,883,692-5,891,668 | + | C1H3g22048 | CX3g026050 | LOC_Os03g12610 | Os03g0227300 | - | Detail |
| C2H3g04602 | 3:5,891,978-5,893,629 | - | C1H3g19915 | CX3g031339 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| C2H3g27028 | 3:5,903,063-5,906,526 | + | C1H3g13701 | CX3g027265 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| C2H3g25912 | 3:5,922,820-5,929,627 | + | C1H3g10637 | CX3g027504 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| C2H3g15726 | 3:5,931,799-5,936,573 | + | C1H3g00645 | CX3g025096 | LOC_Os03g12670 | Os03g0141200 | OsBMY4 | Detail |
| C2H3g08529 | 3:5,935,003-5,936,506 | - | - | CX3g029136 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |