| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10352 | 2:19,343,513-19,347,044 | - | C2H2g12921 | CX2g021166 | LOC_Os02g33930 | Os02g0129000 | - | Detail |
| C1H2g27639 | 2:19,427,735-19,449,962 | + | C2H2g01626 | CX2g024825 | LOC_Os03g64290 | Os02g0545000 | - | Detail |
| C1H2g31615 | 2:19,489,308-19,489,646 | + | C2H2g18126 | CX2g023067 | - | - | - | Detail |
| C1H2g09850 | 2:19,491,742-19,495,080 | + | - | - | - | - | - | Detail |
| C1H2g27118 | 2:19,496,561-19,497,316 | - | C2H2g03353 | CX2g021266 | LOC_Os02g34260 | Os02g0546600 | - | Detail |
| C1H2g07807 | 2:19,525,033-19,527,471 | + | C2H2g28913 | CX2g021833 | LOC_Os02g34320 | Os02g0548100 | - | Detail |
| C1H2g25374 | 2:19,538,380-19,540,898 | + | C2H2g23048 | CX2g022612 | LOC_Os02g34370 | Os02g0548100 | - | Detail |
| C1H2g22824 | 2:19,541,937-19,542,668 | + | C2H2g01870 | CX2g024786 | - | - | - | Detail |
| C1H2g28412 | 2:19,584,781-19,591,765 | + | C2H2g19137 | CX2g021164 | LOC_Os02g48450 | Os02g0469600 | OsACP1 | Detail |
| C1H2g19067 | 2:19,597,640-19,601,165 | + | C2H2g11085 | CX2g022202 | LOC_Os02g34430 | Os02g0549200 | - | Detail |
| C1H2g22829 | 2:19,605,600-19,610,424 | - | C2H2g12630 | CX2g023303 | - | Os02g0549401 | - | Detail |
| C1H2g16065 | 2:19,612,897-19,619,677 | + | C2H2g30100 | CX2g020503 | LOC_Os02g34460 | Os02g0549600 | - | Detail |
| C1H2g11806 | 2:19,631,360-19,632,886 | + | C2H2g10553 | CX2g020153 | LOC_Os02g34490 | Os02g0549900 | - | Detail |
| C1H2g24078 | 2:19,640,124-19,645,958 | + | C2H2g08024 | CX2g022074 | LOC_Os02g34500 | Os02g0550000 | DMD1 | Detail |
| C1H2g08678 | 2:19,647,058-19,648,851 | - | C2H2g03515 | CX2g020686 | LOC_Os02g34510 | Os02g0550100 | - | Detail |
| C1H2g14925 | 2:19,652,042-19,654,726 | + | C2H2g14993 | CX2g020472 | LOC_Os02g34530 | Os02g0550300 | - | Detail |
| C1H2g20025 | 2:19,657,679-19,661,656 | - | C2H2g20189 | CX2g022290 | LOC_Os02g34560 | Os02g0550600 | OsCYT-INV1, OsCyt-inv1 | Detail |
| C1H2g03053 | 2:19,667,960-19,671,304 | - | C2H2g13633 | CX2g023794 | LOC_Os02g34570 | Os02g0550700 | - | Detail |
| C1H2g28652 | 2:19,674,383-19,676,989 | + | C2H2g03451 | CX2g022967 | LOC_Os02g34580 | Os02g0550800 | - | Detail |
| C1H2g26960 | 2:19,677,899-19,680,922 | - | C2H2g01217 | CX2g020128 | LOC_Os02g34590 | Os02g0550900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g22494 | 5:16,642,716-16,645,805 | - | C1H5g26959 | CX5g038106 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| C2H5g11829 | 5:16,655,985-16,661,923 | + | C1H5g04085 | CX5g040922 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| C2H5g25939 | 5:16,663,546-16,666,879 | + | C1H5g22041 | CX5g041090 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| C2H5g22907 | 5:16,667,446-16,671,338 | - | C1H5g10446 | CX5g040421 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| C2H5g21437 | 5:16,686,600-16,698,456 | - | C1H5g00299 | CX5g040140 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| C2H5g07531 | 5:16,713,512-16,714,696 | + | C1H5g09689 | CX5g038444 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| C2H5g01393 | 5:16,717,738-16,718,662 | - | - | CX5g039242 | - | - | - | Detail |
| C2H5g17544 | 5:16,718,825-16,719,860 | + | C1H5g02644 | CX5g040199 | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C2H5g09572 | 5:16,720,279-16,728,625 | - | C1H5g06235 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C2H5g14010 | 5:16,741,952-16,744,658 | + | C1H5g07655 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C2H5g30500 | 5:16,761,498-16,767,214 | - | C1H5g16377 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C2H5g10487 | 5:16,792,590-16,793,159 | + | - | - | - | - | - | Detail |
| C2H5g11444 | 5:16,793,248-16,801,244 | + | C1H5g18086 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C2H5g22366 | 5:16,803,441-16,806,745 | - | C1H5g22231 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C2H5g14510 | 5:16,822,950-16,823,828 | - | C1H5g07753 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C2H5g20401 | 5:16,826,385-16,826,935 | - | C1H5g01736 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C2H5g21665 | 5:16,827,319-16,833,393 | - | C1H5g28806 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C2H5g22578 | 5:16,840,873-16,845,350 | - | C1H5g13458 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C2H5g22810 | 5:16,848,921-16,849,907 | + | C1H5g23907 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C2H5g14027 | 5:16,857,988-16,859,428 | + | C1H5g25708 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |