| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g07638 | 2:18,971,220-18,975,064 | - | C2H2g20516 | CX2g024463 | LOC_Os02g33500 | Os02g0538000 | LAS, TSV2 | Detail |
| C1H2g24278 | 2:18,987,484-18,990,139 | - | C2H2g12718 | CX2g023203 | LOC_Os02g33560 | Os02g0538900 | - | Detail |
| C1H2g09807 | 2:18,990,584-18,991,600 | - | C2H2g17127 | CX2g023203 | LOC_Os02g33560 | Os02g0538900 | - | Detail |
| C1H2g26950 | 2:18,997,001-19,001,096 | + | C2H2g29527 | CX2g019702 | LOC_Os02g33580 | Os02g0539100 | - | Detail |
| C1H2g13439 | 2:19,032,785-19,041,081 | + | C2H2g02484 | CX2g024045 | LOC_Os02g33610 | Os02g0539600 | GRY79 | Detail |
| C1H2g29583 | 2:19,047,488-19,050,932 | - | C2H2g06091 | CX2g022464 | LOC_Os02g33630 | Os02g0539900 | - | Detail |
| C1H2g31833 | 2:19,080,543-19,080,803 | - | C2H2g25081 | - | - | - | - | Detail |
| C1H2g12544 | 2:19,131,946-19,135,704 | + | C2H2g28169 | CX2g022926 | LOC_Os02g33710 | Os02g0541325 | - | Detail |
| C1H2g02670 | 2:19,147,211-19,151,289 | - | C2H2g10478 | CX2g022361 | LOC_Os02g33730 | Os02g0541700 | - | Detail |
| C1H2g27188 | 2:19,153,776-19,154,229 | + | - | - | LOC_Os02g33740 | Os02g0541900 | - | Detail |
| C1H2g31676 | 2:19,154,429-19,154,677 | + | C2H2g27952 | CX2g022174 | LOC_Os02g33740 | Os02g0541900 | - | Detail |
| C1H2g30293 | 2:19,157,417-19,162,575 | - | C2H2g00187 | CX2g018878 | LOC_Os02g33750 | Os02g0542200 | - | Detail |
| C1H2g03056 | 2:19,171,351-19,175,085 | + | - | CX2g023996 | LOC_Os02g33770 | Os02g0542400 | OsGTγ-1, OsGTgamma-1 | Detail |
| C1H2g07889 | 2:19,175,545-19,176,591 | + | C2H2g23863 | CX2g023080 | LOC_Os02g33780 | Os02g0542500 | - | Detail |
| C1H2g27793 | 2:19,186,451-19,187,477 | - | C2H2g18501 | CX2g022789 | LOC_Os02g33790 | - | - | Detail |
| C1H2g08622 | 2:19,187,494-19,187,928 | - | C2H2g01260 | - | - | - | - | Detail |
| C1H2g21560 | 2:19,194,800-19,195,574 | - | C2H2g07033 | CX2g019174 | LOC_Os02g33820 | Os02g0543000 | - | Detail |
| C1H2g07478 | 2:19,198,722-19,201,294 | - | C2H2g22437 | CX2g020648 | LOC_Os02g33830 | Os02g0543100 | - | Detail |
| C1H2g21330 | 2:19,209,535-19,213,591 | + | C2H2g26343 | CX2g023537 | LOC_Os02g33860 | Os02g0543400 | SGW5 | Detail |
| C1H2g10313 | 2:19,231,561-19,234,098 | - | C2H2g00010 | CX2g020736 | LOC_Os02g33890 | Os02g0297200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00536 | 5:10,944,712-10,944,990 | - | C1H5g15592 | - | LOC_Os05g22960 | Os05g0295700 | - | Detail |
| C2H5g11939 | 5:10,946,329-10,949,889 | - | C1H5g21493 | CX5g040395 | LOC_Os05g22970 | Os05g0295800 | GLYI8, OsGLYI8, OsGLYI-8 | Detail |
| C2H5g09032 | 5:10,950,068-10,950,666 | - | C1H5g21493 | - | LOC_Os05g22970 | Os05g0295800 | GLYI8, OsGLYI8, OsGLYI-8 | Detail |
| C2H5g18701 | 5:10,954,696-10,964,569 | - | C1H5g00566 | CX5g039339 | LOC_Os05g22990 | Os05g0295900 | - | Detail |
| C2H5g07041 | 5:10,979,051-10,980,108 | - | C1H5g19321 | CX5g037329 | LOC_Os05g23140 | - | - | Detail |
| C2H5g24059 | 5:10,985,992-10,986,321 | + | C1H5g27869 | CX5g040816 | - | Os05g0297300 | - | Detail |
| C2H5g08500 | 5:10,986,934-10,987,905 | + | C1H5g31671 | CX5g040816 | LOC_Os05g23230 | Os05g0297300 | - | Detail |
| C2H5g14873 | 5:10,990,582-10,991,610 | - | - | CX5g037497 | LOC_Os05g23240 | Os05g0297400 | - | Detail |
| C2H5g30540 | 5:10,996,411-10,999,652 | + | C1H5g08736 | CX5g040339 | LOC_Os05g23260 | Os05g0297900 | - | Detail |
| C2H5g00289 | 5:11,004,406-11,008,514 | + | C1H5g25182 | CX5g038270 | LOC_Os05g23320 | Os05g0298200 | - | Detail |
| C2H5g18528 | 5:11,036,927-11,039,299 | - | C1H5g02291 | CX5g037626 | LOC_Os05g23350 | Os05g0319900 | - | Detail |
| C2H5g24016 | 5:11,072,230-11,085,218 | - | C1H5g16653 | CX5g037365 | - | - | - | Detail |
| C2H5g29749 | 5:11,146,557-11,154,577 | - | - | CX5g039258 | - | - | - | Detail |
| C2H5g17926 | 5:11,160,469-11,162,559 | + | C1H5g13646 | CX5g038183 | LOC_Os05g23800 | Os05g0303700 | - | Detail |
| C2H5g15065 | 5:11,162,806-11,164,499 | + | C1H5g13646 | CX5g038183 | LOC_Os05g23800 | Os05g0303700 | - | Detail |
| C2H5g04253 | 5:11,196,010-11,200,961 | - | C1H5g26522 | CX5g038618 | LOC_Os05g23740 | Os05g0303000 | OsHsp70CP1 | Detail |
| C2H5g24858 | 5:11,207,631-11,211,127 | + | C1H5g22263 | CX5g039634 | LOC_Os05g23720 | Os05g0302700 | - | Detail |
| C2H5g06083 | 5:11,213,982-11,214,752 | - | - | CX5g040551 | LOC_Os05g23700 | Os05g0302600 | - | Detail |
| C2H5g23985 | 5:11,265,454-11,271,048 | + | C1H5g15577 | CX5g037364 | LOC_Os05g23670 | Os05g0302300 | JMJ704 | Detail |
| C2H5g28197 | 5:11,277,116-11,281,706 | + | C1H5g02364 | CX5g037986 | LOC_Os05g23620 | Os05g0301700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |