| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g07638 | 2:18,971,220-18,975,064 | - | C2H2g20516 | CX2g024463 | LOC_Os02g33500 | Os02g0538000 | LAS, TSV2 | Detail |
| C1H2g24278 | 2:18,987,484-18,990,139 | - | C2H2g12718 | CX2g023203 | LOC_Os02g33560 | Os02g0538900 | - | Detail |
| C1H2g09807 | 2:18,990,584-18,991,600 | - | C2H2g17127 | CX2g023203 | LOC_Os02g33560 | Os02g0538900 | - | Detail |
| C1H2g26950 | 2:18,997,001-19,001,096 | + | C2H2g29527 | CX2g019702 | LOC_Os02g33580 | Os02g0539100 | - | Detail |
| C1H2g13439 | 2:19,032,785-19,041,081 | + | C2H2g02484 | CX2g024045 | LOC_Os02g33610 | Os02g0539600 | GRY79 | Detail |
| C1H2g29583 | 2:19,047,488-19,050,932 | - | C2H2g06091 | CX2g022464 | LOC_Os02g33630 | Os02g0539900 | - | Detail |
| C1H2g31833 | 2:19,080,543-19,080,803 | - | C2H2g25081 | - | - | - | - | Detail |
| C1H2g12544 | 2:19,131,946-19,135,704 | + | C2H2g28169 | CX2g022926 | LOC_Os02g33710 | Os02g0541325 | - | Detail |
| C1H2g02670 | 2:19,147,211-19,151,289 | - | C2H2g10478 | CX2g022361 | LOC_Os02g33730 | Os02g0541700 | - | Detail |
| C1H2g27188 | 2:19,153,776-19,154,229 | + | - | - | LOC_Os02g33740 | Os02g0541900 | - | Detail |
| C1H2g31676 | 2:19,154,429-19,154,677 | + | C2H2g27952 | CX2g022174 | LOC_Os02g33740 | Os02g0541900 | - | Detail |
| C1H2g30293 | 2:19,157,417-19,162,575 | - | C2H2g00187 | CX2g018878 | LOC_Os02g33750 | Os02g0542200 | - | Detail |
| C1H2g03056 | 2:19,171,351-19,175,085 | + | - | CX2g023996 | LOC_Os02g33770 | Os02g0542400 | OsGTγ-1, OsGTgamma-1 | Detail |
| C1H2g07889 | 2:19,175,545-19,176,591 | + | C2H2g23863 | CX2g023080 | LOC_Os02g33780 | Os02g0542500 | - | Detail |
| C1H2g27793 | 2:19,186,451-19,187,477 | - | C2H2g18501 | CX2g022789 | LOC_Os02g33790 | - | - | Detail |
| C1H2g08622 | 2:19,187,494-19,187,928 | - | C2H2g01260 | - | - | - | - | Detail |
| C1H2g21560 | 2:19,194,800-19,195,574 | - | C2H2g07033 | CX2g019174 | LOC_Os02g33820 | Os02g0543000 | - | Detail |
| C1H2g07478 | 2:19,198,722-19,201,294 | - | C2H2g22437 | CX2g020648 | LOC_Os02g33830 | Os02g0543100 | - | Detail |
| C1H2g21330 | 2:19,209,535-19,213,591 | + | C2H2g26343 | CX2g023537 | LOC_Os02g33860 | Os02g0543400 | SGW5 | Detail |
| C1H2g10313 | 2:19,231,561-19,234,098 | - | C2H2g00010 | CX2g020736 | LOC_Os02g33890 | Os02g0297200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20297 | 3:6,328,444-6,329,640 | + | C1H3g22268 | CX3g028385 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| C2H3g00447 | 3:6,331,411-6,336,088 | - | C1H3g22029 | CX3g027164 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| C2H3g06567 | 3:6,342,078-6,344,430 | - | C1H3g04582 | CX3g030874 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| C2H3g02755 | 3:6,345,923-6,347,636 | - | C1H3g27078 | CX3g029207 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| C2H3g08839 | 3:6,364,077-6,368,207 | + | C1H3g26089 | CX3g031242 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| C2H3g17418 | 3:6,369,273-6,371,201 | + | C1H3g13556 | CX3g025226 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| C2H3g00836 | 3:6,371,611-6,375,870 | - | C1H3g13432 | CX3g028197 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| C2H3g23746 | 3:6,376,693-6,380,628 | - | C1H3g17503 | CX3g027179 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| C2H3g02723 | 3:6,382,094-6,387,770 | - | C1H3g27354 | CX3g027179 | LOC_Os03g13274 | Os03g0235900 | - | Detail |
| C2H3g28344 | 3:6,399,499-6,402,406 | + | C1H3g10596 | CX3g025606 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| C2H3g11740 | 3:6,408,151-6,410,478 | - | C1H3g09841 | CX3g027825 | LOC_Os03g13340 | Os03g0236675 | - | Detail |
| C2H3g20390 | 3:6,411,350-6,411,985 | + | C1H3g26140 | CX3g027924 | LOC_Os03g13360 | Os03g0236800 | - | Detail |
| C2H3g08095 | 3:6,413,496-6,414,146 | + | C1H3g26595 | CX3g026764 | LOC_Os03g13370 | Os03g0236900 | - | Detail |
| C2H3g11238 | 3:6,416,401-6,424,841 | + | C1H3g30353 | CX3g030333 | LOC_Os03g13370 | Os03g0236966 | OsAPC6 | Detail |
| C2H3g29074 | 3:6,426,982-6,431,326 | + | C1H3g16967 | CX3g025761 | LOC_Os03g13380 | Os03g0237000 | - | Detail |
| C2H3g13980 | 3:6,433,298-6,435,531 | + | - | - | - | - | - | Detail |
| C2H3g28705 | 3:6,440,316-6,444,240 | - | C1H3g08429 | CX3g027254 | LOC_Os03g13400 | Os03g0237250 | OsIDD14, LPA1 | Detail |
| C2H3g29962 | 3:6,467,615-6,468,157 | + | C1H3g09361 | CX3g028559 | LOC_Os03g13450 | Os03g0237500 | - | Detail |
| C2H3g03025 | 3:6,471,256-6,477,248 | - | C1H3g17244 | CX3g028914 | LOC_Os03g13460 | Os03g0237600 | - | Detail |
| C2H3g23135 | 3:6,484,191-6,488,014 | - | C1H3g24201 | CX3g025055 | LOC_Os03g13480 | Os03g0237950 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |