| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g20311 | 2:18,741,455-18,741,996 | - | C2H2g20388 | - | LOC_Os02g33070 | Os02g0533800 | - | Detail |
| C1H2g23938 | 2:18,742,554-18,745,994 | + | C2H2g19843 | CX2g021454 | LOC_Os02g33080 | Os02g0533900 | - | Detail |
| C1H2g03846 | 2:18,775,077-18,780,019 | + | C2H2g12855 | CX2g022901 | LOC_Os02g33110 | Os02g0534400 | OsCIN1 | Detail |
| C1H2g13354 | 2:18,799,649-18,804,618 | - | C2H2g23170 | CX2g020799 | LOC_Os02g33140 | Os02g0534800 | - | Detail |
| C1H2g12121 | 2:18,808,260-18,810,586 | - | C2H2g29478 | CX2g021888 | LOC_Os02g33149 | Os02g0535000 | - | Detail |
| C1H2g12735 | 2:18,818,313-18,819,011 | + | C2H2g20935 | CX2g024855 | LOC_Os02g33170 | Os02g0535300 | - | Detail |
| C1H2g07156 | 2:18,822,799-18,825,840 | - | C2H2g16925 | CX2g023090 | LOC_Os02g33180 | Os02g0535400 | RAR1, Os RAR1 | Detail |
| C1H2g04282 | 2:18,828,634-18,833,567 | + | C2H2g30130 | CX2g021376 | LOC_Os02g33230 | Os02g0535700 | - | Detail |
| C1H2g15215 | 2:18,845,154-18,845,704 | + | C2H2g03654 | CX2g019679 | LOC_Os02g33290 | Os02g0536100 | - | Detail |
| C1H2g02093 | 2:18,850,630-18,852,156 | + | C2H2g01284 | CX2g024104 | LOC_Os02g33310 | Os02g0536300 | - | Detail |
| C1H2g12326 | 2:18,852,952-18,857,037 | + | C2H2g01284 | CX2g023424 | LOC_Os02g33320 | Os02g0536400 | - | Detail |
| C1H2g03704 | 2:18,859,664-18,860,047 | - | C2H2g02831 | CX2g021482 | LOC_Os02g33330 | Os02g0536500 | ACL2 | Detail |
| C1H2g21466 | 2:18,875,867-18,879,329 | - | C2H2g11688 | CX2g021054 | LOC_Os02g33400 | Os02g0537200 | - | Detail |
| C1H2g12557 | 2:18,891,945-18,893,496 | - | C2H2g24901 | CX2g021054 | LOC_Os02g33400 | Os02g0537200 | - | Detail |
| C1H2g26763 | 2:18,910,389-18,914,899 | + | C2H2g08924 | CX2g021201 | LOC_Os02g33420 | Os02g0537400 | - | Detail |
| C1H2g15794 | 2:18,919,212-18,923,690 | - | C2H2g13747 | CX2g019734 | LOC_Os02g33430 | Os02g0537500 | OsE2F1 | Detail |
| C1H2g27959 | 2:18,929,353-18,932,431 | + | - | - | - | - | - | Detail |
| C1H2g00165 | 2:18,932,456-18,936,110 | + | C2H2g14839 | CX2g021967 | LOC_Os02g33450 | Os02g0537700 | OsPRX2, BAS1 | Detail |
| C1H2g04485 | 2:18,945,400-18,949,153 | + | C2H2g21401 | CX2g022895 | LOC_Os02g33460 | Os02g0537800 | - | Detail |
| C1H2g09421 | 2:18,957,911-18,966,605 | - | C2H2g16541 | CX2g020263 | LOC_Os02g33490 | Os02g0537900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18815 | 2:22,964,531-22,973,156 | - | C1H2g02429 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C2H2g29974 | 2:22,984,697-22,984,957 | - | - | - | - | - | - | Detail |
| C2H2g26929 | 2:22,988,593-22,990,462 | + | C1H2g22582 | - | LOC_Os02g40490 | - | - | Detail |
| C2H2g04756 | 2:22,994,675-22,996,352 | + | C1H2g02238 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C2H2g05107 | 2:22,997,619-23,000,421 | + | C1H2g04978 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C2H2g25708 | 2:23,002,033-23,003,523 | - | C1H2g16546 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C2H2g01262 | 2:23,008,365-23,009,939 | - | C1H2g01139 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C2H2g01838 | 2:23,025,294-23,026,795 | + | C1H2g19268 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| C2H2g30582 | 2:23,043,425-23,044,159 | - | - | - | LOC_Os02g40600 | - | - | Detail |
| C2H2g02169 | 2:23,070,406-23,075,582 | - | C1H2g16057 | CX2g023988 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| C2H2g26987 | 2:23,075,966-23,077,800 | + | C1H2g04094 | - | - | - | - | Detail |
| C2H2g19869 | 2:23,080,364-23,080,630 | - | - | - | - | - | - | Detail |
| C2H2g18142 | 2:23,088,767-23,092,303 | + | C1H2g31349 | CX2g019895 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| C2H2g10513 | 2:23,093,099-23,093,482 | + | C1H2g31349 | CX2g020219 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| C2H2g22522 | 2:23,099,083-23,099,503 | + | C1H2g24265 | CX2g023588 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| C2H2g07540 | 2:23,105,722-23,107,218 | + | C1H2g23096 | CX2g024155 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| C2H2g29061 | 2:23,111,389-23,115,393 | + | C1H2g17359 | CX2g024932 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |
| C2H2g23641 | 2:23,118,462-23,120,057 | - | C1H2g17305 | CX2g024918 | LOC_Os02g40750 | Os02g0769900 | - | Detail |
| C2H2g07915 | 2:23,128,520-23,133,173 | - | - | - | - | - | - | Detail |
| C2H2g25432 | 2:23,136,851-23,144,033 | + | C1H2g09682 | CX2g022252 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |