| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g20311 | 2:18,741,455-18,741,996 | - | C2H2g20388 | - | LOC_Os02g33070 | Os02g0533800 | - | Detail |
| C1H2g23938 | 2:18,742,554-18,745,994 | + | C2H2g19843 | CX2g021454 | LOC_Os02g33080 | Os02g0533900 | - | Detail |
| C1H2g03846 | 2:18,775,077-18,780,019 | + | C2H2g12855 | CX2g022901 | LOC_Os02g33110 | Os02g0534400 | OsCIN1 | Detail |
| C1H2g13354 | 2:18,799,649-18,804,618 | - | C2H2g23170 | CX2g020799 | LOC_Os02g33140 | Os02g0534800 | - | Detail |
| C1H2g12121 | 2:18,808,260-18,810,586 | - | C2H2g29478 | CX2g021888 | LOC_Os02g33149 | Os02g0535000 | - | Detail |
| C1H2g12735 | 2:18,818,313-18,819,011 | + | C2H2g20935 | CX2g024855 | LOC_Os02g33170 | Os02g0535300 | - | Detail |
| C1H2g07156 | 2:18,822,799-18,825,840 | - | C2H2g16925 | CX2g023090 | LOC_Os02g33180 | Os02g0535400 | RAR1, Os RAR1 | Detail |
| C1H2g04282 | 2:18,828,634-18,833,567 | + | C2H2g30130 | CX2g021376 | LOC_Os02g33230 | Os02g0535700 | - | Detail |
| C1H2g15215 | 2:18,845,154-18,845,704 | + | C2H2g03654 | CX2g019679 | LOC_Os02g33290 | Os02g0536100 | - | Detail |
| C1H2g02093 | 2:18,850,630-18,852,156 | + | C2H2g01284 | CX2g024104 | LOC_Os02g33310 | Os02g0536300 | - | Detail |
| C1H2g12326 | 2:18,852,952-18,857,037 | + | C2H2g01284 | CX2g023424 | LOC_Os02g33320 | Os02g0536400 | - | Detail |
| C1H2g03704 | 2:18,859,664-18,860,047 | - | C2H2g02831 | CX2g021482 | LOC_Os02g33330 | Os02g0536500 | ACL2 | Detail |
| C1H2g21466 | 2:18,875,867-18,879,329 | - | C2H2g11688 | CX2g021054 | LOC_Os02g33400 | Os02g0537200 | - | Detail |
| C1H2g12557 | 2:18,891,945-18,893,496 | - | C2H2g24901 | CX2g021054 | LOC_Os02g33400 | Os02g0537200 | - | Detail |
| C1H2g26763 | 2:18,910,389-18,914,899 | + | C2H2g08924 | CX2g021201 | LOC_Os02g33420 | Os02g0537400 | - | Detail |
| C1H2g15794 | 2:18,919,212-18,923,690 | - | C2H2g13747 | CX2g019734 | LOC_Os02g33430 | Os02g0537500 | OsE2F1 | Detail |
| C1H2g27959 | 2:18,929,353-18,932,431 | + | - | - | - | - | - | Detail |
| C1H2g00165 | 2:18,932,456-18,936,110 | + | C2H2g14839 | CX2g021967 | LOC_Os02g33450 | Os02g0537700 | OsPRX2, BAS1 | Detail |
| C1H2g04485 | 2:18,945,400-18,949,153 | + | C2H2g21401 | CX2g022895 | LOC_Os02g33460 | Os02g0537800 | - | Detail |
| C1H2g09421 | 2:18,957,911-18,966,605 | - | C2H2g16541 | CX2g020263 | LOC_Os02g33490 | Os02g0537900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03777 | 6:7,003,407-7,004,426 | - | - | CX6g041399 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| C2H6g04113 | 6:7,007,145-7,008,692 | + | C1H6g02316 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C2H6g00648 | 6:7,026,926-7,027,972 | + | C1H6g09969 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C2H6g03619 | 6:7,084,002-7,098,976 | + | C1H6g11559 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C2H6g01049 | 6:7,100,001-7,107,702 | - | C1H6g18024 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C2H6g13770 | 6:7,153,337-7,153,943 | - | C1H6g12074 | CX6g041615 | - | - | - | Detail |
| C2H6g10609 | 6:7,163,058-7,163,564 | + | C1H6g12074 | CX6g045748 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C2H6g05565 | 6:7,164,963-7,165,619 | + | - | CX6g042529 | - | - | - | Detail |
| C2H6g15261 | 6:7,187,480-7,191,271 | - | C1H6g28805 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C2H6g21532 | 6:7,218,192-7,219,673 | - | - | CX6g045707 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| C2H6g29156 | 6:7,257,704-7,259,179 | + | - | CX6g041231 | LOC_Os06g15020 | Os06g0262200 | OsCUT6 | Detail |
| C2H6g22045 | 6:7,300,310-7,301,791 | - | - | CX6g043029 | LOC_Os06g15170 | Os06g0262800 | OsCUT7 | Detail |
| C2H6g13890 | 6:7,319,272-7,320,855 | + | - | - | - | - | - | Detail |
| C2H6g18864 | 6:7,320,873-7,321,216 | + | - | - | - | - | - | Detail |
| C2H6g20291 | 6:7,321,312-7,323,501 | - | - | CX6g043029 | LOC_Os06g15250 | Os06g0263400 | OsCUT8 | Detail |
| C2H6g11848 | 6:7,340,325-7,342,073 | + | C1H6g14061 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C2H6g27689 | 6:7,357,477-7,363,510 | + | C1H6g03979 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C2H6g23695 | 6:7,373,848-7,378,740 | + | C1H6g06916 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C2H6g28059 | 6:7,378,868-7,379,221 | - | - | CX6g043321 | LOC_Os06g15380 | Os06g0264700 | - | Detail |
| C2H6g15511 | 6:7,380,099-7,380,488 | - | - | CX6g042083 | LOC_Os06g15390 | Os06g0264700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |