| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15691 | 2:18,518,729-18,530,008 | - | C2H2g20323 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C1H2g29366 | 2:18,540,315-18,542,956 | - | C2H2g15285 | CX2g024606 | LOC_Os02g32690 | Os02g0318450 | - | Detail |
| C1H2g14806 | 2:18,546,359-18,556,471 | - | C2H2g15285 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C1H2g11870 | 2:18,557,962-18,558,666 | - | C2H2g20296 | - | LOC_Os02g32700 | - | - | Detail |
| C1H2g12236 | 2:18,560,447-18,562,253 | - | - | - | - | - | - | Detail |
| C1H2g00920 | 2:18,571,975-18,576,501 | + | C2H2g10414 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C1H2g24766 | 2:18,578,241-18,579,947 | + | C2H2g18145 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C1H2g22581 | 2:18,590,623-18,592,115 | - | C2H2g17400 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C1H2g07352 | 2:18,593,618-18,601,188 | - | C2H2g26264 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C1H2g17686 | 2:18,610,094-18,611,375 | - | C2H2g27061 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C1H2g06488 | 2:18,618,849-18,619,328 | + | C2H2g29992 | CX2g020180 | LOC_Os02g32840 | Os02g0530300 | OsSAP5 | Detail |
| C1H2g03635 | 2:18,636,340-18,636,609 | + | C2H2g28791 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C1H2g17644 | 2:18,641,166-18,646,101 | - | C2H2g06644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C1H2g20262 | 2:18,652,232-18,659,840 | + | C2H2g13474 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C1H2g17709 | 2:18,669,439-18,670,607 | - | C2H2g09518 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| C1H2g28902 | 2:18,685,577-18,690,879 | + | C2H2g15698 | CX2g019431 | LOC_Os02g32970 | Os04g0411800 | - | Detail |
| C1H2g22832 | 2:18,714,021-18,717,719 | + | C2H2g22707 | CX2g023689 | LOC_Os02g33000 | Os02g0532900 | - | Detail |
| C1H2g16813 | 2:18,717,827-18,723,569 | - | C2H2g18655 | CX2g019017 | LOC_Os02g33010 | Os02g0533000 | - | Detail |
| C1H2g00080 | 2:18,727,159-18,729,594 | + | C2H2g19682 | CX2g024724 | LOC_Os02g33020 | Os02g0533200 | - | Detail |
| C1H2g31211 | 2:18,730,871-18,733,216 | + | C2H2g19682 | CX2g023010 | LOC_Os02g33030 | Os02g0533300 | OsalphaCA1, OsαCA1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g29547 | 1:16,832,878-16,835,248 | - | C1H1g16518 | CX1g002333 | LOC_Os01g32780 | Os01g0511100 | OsUSP5 | Detail |
| C2H1g25988 | 1:16,837,023-16,840,169 | - | C1H1g30895 | CX1g000349 | LOC_Os01g32790 | Os01g0511200 | - | Detail |
| C2H1g01415 | 1:16,841,809-16,845,294 | - | C1H1g00873 | CX1g005541 | LOC_Os01g32800 | Os01g0511300 | OsRpn9a | Detail |
| C2H1g19462 | 1:16,860,843-16,864,257 | - | C1H1g16898 | CX1g003225 | LOC_Os01g32830 | Os01g0511600 | OsPLGG1 | Detail |
| C2H1g19337 | 1:16,899,183-16,907,044 | + | C1H1g25757 | CX1g003635 | LOC_Os01g32870 | Os01g0512100 | - | Detail |
| C2H1g17681 | 1:16,931,308-16,932,258 | + | C1H1g18492 | - | - | - | - | Detail |
| C2H1g17712 | 1:16,932,896-16,933,223 | + | C1H1g25480 | CX1g001290 | LOC_Os01g32900 | - | - | Detail |
| C2H1g03966 | 1:16,940,050-16,940,761 | + | C1H1g22771 | CX1g001290 | LOC_Os01g32920 | Os01g0512700 | - | Detail |
| C2H1g26017 | 1:16,943,373-16,944,112 | + | C1H1g27769 | CX1g001406 | LOC_Os01g32930 | Os01g0512800 | - | Detail |
| C2H1g24494 | 1:16,947,960-16,955,382 | - | C1H1g02880 | CX1g004321 | LOC_Os01g32964 | Os01g0513100 | - | Detail |
| C2H1g05942 | 1:16,965,438-16,973,952 | - | C1H1g13876 | CX1g004574 | LOC_Os01g32980 | Os01g0513200 | - | Detail |
| C2H1g28038 | 1:16,982,263-16,985,606 | + | C1H1g02604 | CX1g003028 | LOC_Os01g33000 | Os01g0513400 | - | Detail |
| C2H1g27810 | 1:16,991,444-16,993,467 | - | C1H1g22987 | CX1g006725 | LOC_Os01g33020 | Os01g0513700 | - | Detail |
| C2H1g12307 | 1:16,995,193-16,997,326 | - | C1H1g30759 | CX1g007248 | LOC_Os01g33030 | Os01g0513800 | - | Detail |
| C2H1g12454 | 1:17,015,225-17,021,837 | + | C1H1g09298 | CX1g000923 | LOC_Os01g33040 | Os01g0513900 | - | Detail |
| C2H1g17423 | 1:17,025,427-17,027,932 | - | C1H1g02667 | CX1g002054 | LOC_Os01g33050 | Os01g0514000 | - | Detail |
| C2H1g15853 | 1:17,028,304-17,038,183 | + | C1H1g14994 | CX1g000762 | LOC_Os01g33060 | Os01g0514300 | - | Detail |
| C2H1g02122 | 1:17,041,019-17,043,235 | + | C1H1g01968 | CX1g002835 | LOC_Os01g33070 | Os01g0514450 | - | Detail |
| C2H1g28988 | 1:17,052,789-17,059,255 | + | C1H1g23037 | CX1g003510 | LOC_Os01g33080 | Os01g0514600 | - | Detail |
| C2H1g05248 | 1:17,067,099-17,070,330 | + | C1H1g14522 | CX1g002745 | LOC_Os01g33090 | Os01g0514700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |