| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g31667 | 2:17,885,956-17,886,543 | - | C2H2g28412 | - | - | - | - | Detail |
| C1H2g24792 | 2:17,916,077-17,922,839 | + | C2H2g07464 | CX2g019490 | LOC_Os02g31220 | Os02g0517300 | - | Detail |
| C1H2g15770 | 2:17,978,975-17,987,274 | + | C2H2g15001 | CX2g023271 | LOC_Os02g31290 | Os02g0517531 | - | Detail |
| C1H2g21755 | 2:17,995,717-18,000,031 | - | C2H2g13964 | CX2g023733 | LOC_Os02g32280 | Os02g0522700 | - | Detail |
| C1H2g11106 | 2:18,021,491-18,022,224 | - | C2H2g30310 | CX2g024433 | LOC_Os02g32200 | Os02g0521700 | - | Detail |
| C1H2g08992 | 2:18,023,824-18,027,678 | - | C2H2g10717 | CX2g023733 | LOC_Os02g32190 | Os02g0521600 | - | Detail |
| C1H2g18001 | 2:18,032,374-18,036,561 | - | C2H2g04683 | CX2g023733 | LOC_Os02g32180 | Os02g0521500 | - | Detail |
| C1H2g31338 | 2:18,038,769-18,045,521 | + | C2H2g12935 | CX2g023072 | LOC_Os02g32160 | Os02g0521300 | OsBON1 | Detail |
| C1H2g24096 | 2:18,054,263-18,055,639 | + | C2H2g24508 | CX2g018917 | LOC_Os02g32140 | Os02g0521100 | - | Detail |
| C1H2g18885 | 2:18,058,525-18,062,739 | + | C2H2g06534 | CX2g024178 | LOC_Os02g32120 | Os02g0520800 | - | Detail |
| C1H2g21080 | 2:18,067,317-18,070,779 | + | C2H2g08579 | CX2g024646 | LOC_Os02g32110 | Os02g0520750 | - | Detail |
| C1H2g10881 | 2:18,090,851-18,093,166 | + | C2H2g05235 | CX2g023239 | LOC_Os02g32060 | Os02g0520100 | - | Detail |
| C1H2g16321 | 2:18,107,297-18,108,034 | + | C2H2g10058 | CX2g023911 | LOC_Os02g32040 | Os02g0520000 | - | Detail |
| C1H2g03847 | 2:18,109,827-18,114,952 | - | C2H2g00234 | CX2g024053 | LOC_Os02g32030 | Os02g0519900 | - | Detail |
| C1H2g28859 | 2:18,123,163-18,129,827 | + | C2H2g10502 | CX2g019128 | LOC_Os02g31960 | Os02g0519300 | - | Detail |
| C1H2g01095 | 2:18,139,849-18,144,654 | + | C2H2g22234 | CX2g024650 | LOC_Os02g31940 | Os02g0519100 | - | Detail |
| C1H2g25721 | 2:18,170,649-18,173,630 | + | C2H2g05067 | CX2g022316 | LOC_Os02g31910 | Os02g0518600 | - | Detail |
| C1H2g03539 | 2:18,176,194-18,179,544 | + | C2H2g06119 | CX2g020106 | LOC_Os02g31890 | Os02g0518500 | - | Detail |
| C1H2g17575 | 2:18,186,303-18,194,377 | + | C2H2g04543 | CX2g022051 | LOC_Os02g31874 | Os02g0518100 | - | Detail |
| C1H2g16531 | 2:18,201,525-18,202,112 | + | C2H2g25898 | CX2g021614 | LOC_Os02g31840 | Os02g0517700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07939 | 1:30,166,036-30,168,196 | - | C1H1g19538 | CX1g005593 | LOC_Os01g58730 | Os01g0801500 | - | Detail |
| C2H1g30108 | 1:30,168,609-30,171,707 | - | C1H1g05474 | CX1g003950 | LOC_Os01g58740 | Os01g0801600 | - | Detail |
| C2H1g26051 | 1:30,172,897-30,176,258 | - | C1H1g14045 | CX1g005695 | LOC_Os01g58750 | Os01g0801700 | OsGCD1 | Detail |
| C2H1g19105 | 1:30,182,459-30,184,419 | - | - | - | - | - | - | Detail |
| C2H1g24587 | 1:30,197,757-30,202,818 | + | C1H1g01326 | CX1g000361 | LOC_Os01g58790 | Os01g0802100 | OsIspE, IspE, OsCMK, CMK | Detail |
| C2H1g08686 | 1:30,216,620-30,218,774 | - | C1H1g15075 | CX1g002565 | LOC_Os01g58860 | Os01g0802700 | OsPIN9 | Detail |
| C2H1g30330 | 1:30,232,946-30,233,720 | + | C1H1g24422 | CX1g002172 | LOC_Os01g58890 | Os01g0803200 | - | Detail |
| C2H1g25597 | 1:30,243,490-30,245,237 | - | C1H1g07293 | CX1g000223 | LOC_Os01g58910 | Os01g0803300 | - | Detail |
| C2H1g05023 | 1:30,257,504-30,259,030 | + | C1H1g24602 | CX1g005013 | LOC_Os01g58960 | Os01g0803800 | CYP94D12, OsCYP94D12 | Detail |
| C2H1g26033 | 1:30,261,999-30,263,537 | + | C1H1g19345 | CX1g005013 | LOC_Os01g58970 | Os01g0803900 | CYP94D11, OsCYP94D11, OsCYPq1 | Detail |
| C2H1g28126 | 1:30,286,808-30,288,426 | - | C1H1g26715 | CX1g005195 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| C2H1g18483 | 1:30,291,209-30,292,424 | - | C1H1g02848 | CX1g000028 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| C2H1g25136 | 1:30,292,535-30,298,269 | + | C1H1g13654 | CX1g000520 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| C2H1g18311 | 1:30,299,357-30,299,566 | - | C1H12g00195 | - | - | - | - | Detail |
| C2H1g25416 | 1:30,299,605-30,300,492 | - | - | CX1g005761 | - | - | - | Detail |
| C2H1g00011 | 1:30,300,738-30,301,334 | + | C1H1g23718 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C2H1g05127 | 1:30,302,551-30,303,204 | + | C1H1g23718 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C2H1g05794 | 1:30,303,559-30,306,662 | - | C1H1g31482 | CX1g004982 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| C2H1g03484 | 1:30,307,605-30,313,872 | - | C1H1g30942 | CX1g001600 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| C2H1g17768 | 1:30,315,471-30,319,142 | - | C1H1g01953 | CX1g000155 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |