| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g08439 | 2:17,294,749-17,296,321 | + | C2H2g26618 | CX2g023994 | LOC_Os02g30190 | Os02g0504700 | - | Detail |
| C1H2g16174 | 2:17,296,987-17,302,262 | - | C2H2g18925 | CX2g023521 | LOC_Os02g30200 | Os02g0504800 | - | Detail |
| C1H2g10661 | 2:17,303,428-17,306,511 | - | C2H2g05236 | CX2g022225 | LOC_Os02g30210 | Os02g0504900 | - | Detail |
| C1H2g27409 | 2:17,318,839-17,321,586 | + | C2H2g14296 | CX2g021271 | LOC_Os02g30230 | Os02g0505400 | EXO70F2, OsEXO70F2, OsExo70F2, OrysaF2_Exo70, OsExo70-F2, Exo70-F2 | Detail |
| C1H2g02109 | 2:17,342,774-17,348,033 | + | C2H2g08041 | CX2g020887 | LOC_Os02g30280 | Os02g0506100 | - | Detail |
| C1H2g13436 | 2:17,351,760-17,352,149 | - | C2H2g03240 | CX2g024723 | - | - | - | Detail |
| C1H2g03278 | 2:17,367,810-17,369,242 | - | C2H2g30301 | CX2g023775 | LOC_Os02g30300 | Os02g0506400 | - | Detail |
| C1H2g19623 | 2:17,383,418-17,384,005 | - | C2H2g23409 | CX2g023884 | - | Os03g0760100 | - | Detail |
| C1H2g29325 | 2:17,384,523-17,390,428 | + | C2H2g11018 | CX2g024230 | LOC_Os02g30310 | Os02g0506500 | - | Detail |
| C1H2g25993 | 2:17,445,222-17,447,846 | + | C2H2g16549 | CX2g021665 | LOC_Os02g30410 | Os02g0507400 | - | Detail |
| C1H2g15570 | 2:17,477,535-17,480,948 | - | C2H2g03803 | CX2g019251 | LOC_Os02g30460 | Os02g0508000 | - | Detail |
| C1H2g15214 | 2:17,490,483-17,490,695 | + | C2H2g30467 | CX2g019887 | LOC_Os02g30550 | Os02g0508801 | - | Detail |
| C1H2g05343 | 2:17,501,092-17,501,301 | + | C2H2g08542 | CX2g024119 | LOC_Os02g30600 | Os02g0509500 | - | Detail |
| C1H2g13933 | 2:17,506,225-17,507,362 | + | C2H2g25563 | CX2g020143 | LOC_Os02g30610 | Os02g0509600 | - | Detail |
| C1H2g20907 | 2:17,511,944-17,515,872 | + | C2H2g13397 | - | - | - | - | Detail |
| C1H2g23373 | 2:17,516,872-17,520,841 | - | C2H2g30645 | CX2g022409 | LOC_Os02g30624 | Os02g0510100 | - | Detail |
| C1H2g19069 | 2:17,521,234-17,523,168 | + | C2H2g22095 | CX2g021781 | LOC_Os02g30630 | Os02g0510200 | ALS, OsALS, AHAS | Detail |
| C1H2g20090 | 2:17,524,615-17,526,837 | - | C2H2g24229 | CX2g019067 | LOC_Os02g30640 | Os02g0510300 | - | Detail |
| C1H2g15669 | 2:17,535,572-17,539,013 | + | C2H2g00272 | CX2g019118 | LOC_Os02g30650 | Os02g0510600 | - | Detail |
| C1H2g03459 | 2:17,553,469-17,554,711 | - | C2H2g20033 | CX2g019051 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21930 | 3:32,150,556-32,154,996 | + | C1H3g04060 | CX3g029514 | LOC_Os03g62200 | Os03g0838400 | - | Detail |
| C2H3g30547 | 3:32,154,179-32,155,651 | - | C1H3g30110 | - | - | - | - | Detail |
| C2H3g29109 | 3:32,155,144-32,155,530 | + | C1H3g03475 | CX3g029120 | LOC_Os03g62210 | Os03g0838500 | - | Detail |
| C2H3g14459 | 3:32,163,817-32,165,237 | - | C1H3g08024 | CX3g028242 | LOC_Os03g62240 | Os03g0838900 | - | Detail |
| C2H3g18580 | 3:32,166,727-32,169,276 | - | C1H3g14166 | CX3g026663 | LOC_Os03g62250 | Os03g0839000 | - | Detail |
| C2H3g04219 | 3:32,170,446-32,174,439 | - | C1H3g19313 | CX3g026956 | LOC_Os03g62260 | Os03g0839100 | - | Detail |
| C2H3g25899 | 3:32,181,533-32,185,188 | + | C1H3g09907 | CX3g025647 | LOC_Os03g62270 | Os03g0839200 | SMG4 | Detail |
| C2H3g29754 | 3:32,199,447-32,199,857 | - | C1H3g11170 | CX3g026655 | LOC_Os03g62330 | Os03g0839800 | - | Detail |
| C2H3g16491 | 3:32,205,796-32,210,390 | - | C1H3g19828 | CX3g027925 | LOC_Os03g62340 | Os03g0839900 | - | Detail |
| C2H3g23134 | 3:32,225,617-32,234,890 | - | C1H3g10496 | CX3g027463 | LOC_Os03g62388 | Os03g0840500 | - | Detail |
| C2H3g17763 | 3:32,236,269-32,239,656 | - | C1H3g17885 | CX3g031342 | LOC_Os03g62400 | Os03g0627100 | - | Detail |
| C2H3g05770 | 3:32,240,626-32,245,153 | - | C1H3g03752 | CX3g030069 | LOC_Os03g62410 | Os03g0840800 | - | Detail |
| C2H3g27419 | 3:32,246,352-32,249,035 | - | C1H3g30697 | CX3g028979 | LOC_Os03g62420 | Os03g0840900 | DVB1 | Detail |
| C2H3g06584 | 3:32,250,917-32,255,271 | - | C1H3g04157 | CX3g025236 | LOC_Os03g62430 | Os03g0841100 | - | Detail |
| C2H3g20263 | 3:32,261,597-32,263,501 | - | C1H3g25165 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C2H3g22865 | 3:32,264,375-32,270,473 | - | C1H3g04020 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C2H3g23885 | 3:32,271,472-32,276,749 | - | C1H3g13920 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C2H3g18445 | 3:32,292,035-32,295,016 | + | C1H3g00003 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C2H3g22112 | 3:32,296,303-32,298,057 | - | C1H3g05358 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C2H3g14550 | 3:32,300,122-32,301,481 | - | C1H3g18020 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |