| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10493 | 1:9,425,542-9,428,886 | - | C2H1g01894 | - | LOC_Os01g17080 | - | - | Detail |
| C1H1g09358 | 1:9,429,597-9,431,107 | - | C2H1g23760 | CX1g003482 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| C1H1g20536 | 1:9,432,113-9,435,734 | - | C2H1g28620 | CX1g007116 | LOC_Os01g18630 | Os01g0290000 | - | Detail |
| C1H1g06449 | 1:9,437,027-9,440,987 | - | C2H1g18032 | CX1g001189 | LOC_Os01g18640 | Os01g0290100 | OsLCD1 | Detail |
| C1H1g00431 | 1:9,445,144-9,449,265 | + | C2H1g16260 | CX1g003793 | LOC_Os01g18660 | Os01g0290600 | OsLCD2, OsCS1 | Detail |
| C1H1g25669 | 1:9,451,061-9,457,278 | - | C2H1g08075 | CX1g004035 | LOC_Os01g18670 | Os01g0290700 | - | Detail |
| C1H1g08871 | 1:9,483,581-9,487,369 | - | C2H1g00537 | CX1g000346 | LOC_Os01g18744 | Os01g0291500 | - | Detail |
| C1H1g01604 | 1:9,556,337-9,560,848 | + | C2H1g10238 | CX1g000147 | LOC_Os01g18800 | Os01g0292200 | - | Detail |
| C1H1g22184 | 1:9,569,781-9,571,127 | + | C2H1g11528 | CX1g001555 | LOC_Os01g18840 | Os01g0292700 | OsIF, OsIFL | Detail |
| C1H1g27588 | 1:9,573,662-9,580,320 | + | C2H1g12039 | - | - | - | - | Detail |
| C1H1g00008 | 1:9,580,724-9,583,867 | - | C2H1g10329 | CX1g003929 | LOC_Os01g18860 | Os01g0293000 | OsSAMS3 | Detail |
| C1H1g09181 | 1:9,589,366-9,590,807 | - | C2H1g25441 | CX1g003845 | LOC_Os01g18870 | Os01g0293100 | OsbHLH142, bHLH142, TIP2 | Detail |
| C1H1g01661 | 1:9,599,626-9,602,565 | - | C2H1g09043 | CX1g004583 | LOC_Os01g18890 | - | - | Detail |
| C1H1g21655 | 1:9,604,939-9,606,211 | - | C2H1g23015 | CX1g006222 | LOC_Os01g18890 | Os01g0327400 | - | Detail |
| C1H1g00275 | 1:9,617,250-9,618,375 | - | C2H1g10639 | CX1g006222 | LOC_Os01g18910 | Os01g0543100 | - | Detail |
| C1H1g13113 | 1:9,620,920-9,621,144 | + | C2H1g22622 | - | - | - | - | Detail |
| C1H1g31670 | 1:9,624,048-9,625,592 | - | C2H1g04900 | CX1g003830 | LOC_Os01g18930 | Os01g0293900 | - | Detail |
| C1H1g26584 | 1:9,636,694-9,637,171 | + | C2H1g16725 | - | - | - | - | Detail |
| C1H1g26555 | 1:9,637,433-9,637,927 | + | C2H1g16725 | - | - | - | - | Detail |
| C1H1g05370 | 1:9,639,481-9,640,626 | - | C2H1g19641 | CX1g004213 | LOC_Os01g18950 | Os01g0294500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g05202 | 7:6,468,978-6,471,786 | + | C1H7g25642 | CX7g050072 | LOC_Os07g12830 | Os07g0232200 | - | Detail |
| C2H7g00996 | 7:6,486,677-6,487,550 | - | C1H7g22619 | - | - | - | - | Detail |
| C2H7g17093 | 7:6,504,741-6,508,049 | + | C1H7g02868 | CX7g046316 | LOC_Os07g12890 | Os07g0232800 | - | Detail |
| C2H7g01423 | 7:6,511,667-6,515,612 | - | C1H7g20763 | CX7g049630 | LOC_Os07g12900 | Os07g0232900 | HMA3, OsHMA3, OsHMA3a, OsHMA3n, osHMA3 | Detail |
| C2H7g02241 | 7:6,518,662-6,519,438 | + | C1H7g22364 | CX7g047155 | - | Os07g0233200 | - | Detail |
| C2H7g17520 | 7:6,521,330-6,524,398 | - | C1H7g03828 | CX7g047399 | LOC_Os07g12910 | Os07g0233300 | - | Detail |
| C2H7g22291 | 7:6,556,140-6,559,884 | + | C1H7g19486 | CX7g047888 | LOC_Os07g13170 | Os07g0235800 | SNB, AP2/EREBP73, OsSNB | Detail |
| C2H7g18355 | 7:6,608,745-6,609,731 | - | C1H7g24592 | CX7g046765 | LOC_Os07g13260 | Os07g0236700 | - | Detail |
| C2H7g02587 | 7:6,640,150-6,645,084 | + | C1H7g18736 | CX7g046569 | LOC_Os07g13270 | Os07g0236800 | - | Detail |
| C2H7g10756 | 7:6,647,230-6,647,991 | - | - | - | LOC_Os07g13280 | Os07g0237100 | - | Detail |
| C2H7g29024 | 7:6,650,871-6,653,137 | - | C1H7g02129 | - | LOC_Os07g13280 | Os07g0237100 | - | Detail |
| C2H7g03501 | 7:6,655,110-6,655,613 | - | C1H7g02129 | - | LOC_Os07g13280 | Os07g0237100 | - | Detail |
| C2H7g10881 | 7:6,658,075-6,658,314 | - | C1H7g20300 | CX7g046591 | LOC_Os07g13310 | Os07g0237200 | - | Detail |
| C2H7g01594 | 7:6,689,101-6,689,325 | - | C1H7g20300 | CX7g046591 | LOC_Os07g13440 | Os07g0238500 | - | Detail |
| C2H7g09512 | 7:6,691,937-6,692,173 | - | C1H7g20300 | CX7g046591 | LOC_Os07g13450 | Os07g0238600 | - | Detail |
| C2H7g11470 | 7:6,711,858-6,712,530 | - | C1H7g20832 | CX7g046873 | LOC_Os07g13490 | Os07g0239000 | - | Detail |
| C2H7g10146 | 7:6,714,241-6,714,441 | - | C1H7g14711 | CX7g046873 | LOC_Os07g13490 | - | - | Detail |
| C2H7g15112 | 7:6,725,332-6,728,197 | - | C1H7g27972 | CX7g048182 | LOC_Os07g13520 | Os07g0239200 | - | Detail |
| C2H7g23533 | 7:6,729,419-6,732,527 | - | C1H7g07495 | CX7g050229 | LOC_Os07g13530 | Os07g0239400 | - | Detail |
| C2H7g27410 | 7:6,740,321-6,744,994 | - | C1H7g01063 | CX7g049811 | LOC_Os07g13540 | Os07g0239600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |