| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09834 | 1:9,111,388-9,111,723 | + | C2H1g08442 | - | - | - | - | Detail |
| C1H1g31050 | 1:9,113,543-9,122,637 | + | C2H1g22354 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C1H1g09627 | 1:9,124,603-9,125,372 | - | C2H1g13905 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C1H1g10680 | 1:9,132,796-9,135,738 | + | C2H1g17254 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C1H1g13588 | 1:9,141,749-9,142,612 | - | C2H1g07308 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C1H1g17641 | 1:9,154,576-9,155,375 | - | C2H1g20440 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C1H1g06479 | 1:9,163,852-9,166,083 | - | C2H1g10789 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C1H1g05697 | 1:9,211,047-9,214,437 | + | C2H1g03219 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C1H1g18723 | 1:9,219,612-9,223,119 | - | C2H1g23388 | CX1g006989 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g02909 | 1:9,238,369-9,239,842 | - | C2H1g25947 | CX1g001405 | LOC_Os11g02650 | - | - | Detail |
| C1H1g25972 | 1:9,241,032-9,242,334 | - | C2H1g12260 | - | LOC_Os01g13050 | Os01g0861400 | - | Detail |
| C1H1g02936 | 1:9,244,036-9,247,610 | + | C2H1g13264 | CX1g004036 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| C1H1g02001 | 1:9,260,143-9,263,439 | + | C2H1g18493 | CX1g000296 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| C1H1g26094 | 1:9,285,715-9,286,050 | + | C2H1g16973 | CX1g002314 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| C1H1g20358 | 1:9,288,357-9,288,734 | - | C2H1g04657 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g26001 | 1:9,289,217-9,289,708 | - | C2H1g10428 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g01375 | 1:9,324,450-9,324,810 | - | C2H1g21581 | CX1g005603 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| C1H1g15975 | 1:9,340,737-9,341,039 | - | C2H1g03324 | - | LOC_Os01g18490 | Os01g0288800 | - | Detail |
| C1H1g27658 | 1:9,376,678-9,383,015 | + | C2H1g00434 | CX1g004171 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| C1H1g31040 | 1:9,410,229-9,411,702 | - | C2H1g15794 | CX1g002453 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g23033 | 7:11,387,780-11,389,802 | + | C1H7g09186 | CX7g048647 | LOC_Os07g23570 | Os07g0418500 | - | Detail |
| C2H7g29525 | 7:11,403,183-11,403,633 | + | - | CX7g048712 | LOC_Os07g23690 | - | - | Detail |
| C2H7g02759 | 7:11,405,964-11,406,741 | + | C1H7g13863 | CX7g048712 | LOC_Os07g23690 | - | - | Detail |
| C2H7g06226 | 7:11,406,794-11,407,042 | + | C1H7g13863 | CX7g048712 | LOC_Os07g23600 | - | - | Detail |
| C2H7g22274 | 7:11,418,224-11,418,967 | - | - | CX7g049130 | LOC_Os07g23640 | Os07g0418600 | OsRePRP2.2 | Detail |
| C2H7g06595 | 7:11,429,165-11,431,975 | - | - | CX7g050180 | - | - | - | Detail |
| C2H7g00471 | 7:11,433,184-11,433,927 | + | - | CX7g047096 | LOC_Os07g23660 | Os07g0418700 | OsRePRP2.1 | Detail |
| C2H7g20500 | 7:11,449,495-11,449,980 | - | C1H7g01051 | CX7g046004 | LOC_Os07g23710 | Os07g0419000 | - | Detail |
| C2H7g13681 | 7:11,450,041-11,450,286 | - | C1H7g01477 | CX7g048647 | LOC_Os07g23570 | Os07g0419100 | - | Detail |
| C2H7g07995 | 7:11,451,032-11,452,555 | + | - | CX7g046957 | LOC_Os07g23720 | Os07g0419200 | - | Detail |
| C2H7g19567 | 7:11,455,426-11,458,567 | + | - | - | - | - | - | Detail |
| C2H7g08809 | 7:11,465,796-11,478,648 | + | C1H7g25494 | CX7g047032 | LOC_Os07g23740 | Os07g0419500 | - | Detail |
| C2H7g15194 | 7:11,492,823-11,494,457 | + | C1H7g18872 | CX7g047321 | LOC_Os07g23770 | - | - | Detail |
| C2H7g07020 | 7:11,503,589-11,504,596 | - | C1H7g30425 | CX7g046278 | LOC_Os07g23790 | Os07g0419800 | - | Detail |
| C2H7g01130 | 7:11,504,611-11,506,829 | - | C1H7g02229 | - | - | - | - | Detail |
| C2H7g24877 | 7:11,509,856-11,510,726 | + | C1H7g08530 | CX7g048081 | LOC_Os07g23810 | Os07g0420000 | - | Detail |
| C2H7g25850 | 7:11,535,938-11,548,688 | + | C1H7g06532 | CX7g046404 | LOC_Os07g23880 | Os07g0420700 | - | Detail |
| C2H7g04150 | 7:11,564,698-11,566,445 | - | C1H7g01143 | CX7g049898 | LOC_Os07g23900 | Os07g0421000 | - | Detail |
| C2H7g22766 | 7:11,576,003-11,581,492 | - | C1H7g24150 | CX7g047374 | LOC_Os07g23930 | - | - | Detail |
| C2H7g25087 | 7:11,585,446-11,585,814 | + | C1H7g31541 | CX7g046404 | LOC_Os07g23944 | Os07g0421300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |