| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00567 | 2:8,817,247-8,818,441 | + | C2H2g28348 | CX2g024567 | LOC_Os02g16730 | Os02g0267200 | - | Detail |
| C1H2g11320 | 2:8,833,313-8,833,760 | - | C2H2g17663 | CX2g023694 | - | - | - | Detail |
| C1H2g13618 | 2:8,855,606-8,856,506 | + | C2H2g24106 | CX2g021537 | LOC_Os02g16780 | Os02g0267700 | - | Detail |
| C1H2g11522 | 2:8,858,119-8,858,892 | - | C2H2g13728 | - | - | - | - | Detail |
| C1H2g05781 | 2:8,860,618-8,861,558 | + | C2H2g12202 | CX2g021537 | LOC_Os02g16800 | Os02g0267900 | - | Detail |
| C1H2g02783 | 2:8,872,276-8,873,203 | + | C2H2g00442 | CX2g023868 | LOC_Os02g16809 | Os02g0268400 | - | Detail |
| C1H2g00742 | 2:8,874,359-8,876,195 | + | C2H2g01503 | CX2g024471 | LOC_Os02g16830 | Os02g0268300 | - | Detail |
| C1H2g02775 | 2:8,879,966-8,881,353 | - | C2H2g15009 | CX2g023868 | LOC_Os02g16830 | Os02g0268300 | - | Detail |
| C1H2g04174 | 2:8,882,959-8,883,889 | - | C2H2g14228 | CX2g022143 | LOC_Os02g16809 | Os02g0268400 | - | Detail |
| C1H2g24493 | 2:8,891,603-8,892,723 | - | C2H2g09405 | CX2g021658 | LOC_Os02g16850 | Os02g0268600 | - | Detail |
| C1H2g31551 | 2:8,904,162-8,909,740 | - | C2H2g26499 | CX2g020063 | LOC_Os02g16880 | Os02g0269000 | - | Detail |
| C1H2g26008 | 2:8,928,081-8,928,486 | + | C2H2g29316 | CX2g020222 | LOC_Os02g16909 | Os02g0269200 | - | Detail |
| C1H2g18126 | 2:8,937,308-8,943,168 | - | C2H2g01546 | CX2g020252 | LOC_Os02g16940 | Os02g0269600 | - | Detail |
| C1H2g15972 | 2:8,960,463-8,960,663 | - | - | CX2g020056 | - | - | - | Detail |
| C1H2g08821 | 2:8,960,695-8,961,303 | - | C2H2g29172 | CX2g020275 | - | - | - | Detail |
| C1H2g11770 | 2:8,971,557-8,974,660 | - | - | - | - | - | - | Detail |
| C1H2g08764 | 2:8,980,387-8,984,436 | - | C2H2g07149 | CX2g022614 | LOC_Os02g17000 | Os02g0270800 | - | Detail |
| C1H2g02863 | 2:9,022,032-9,025,233 | - | C2H2g12321 | CX2g022614 | LOC_Os02g17150 | Os02g0270200 | - | Detail |
| C1H2g01288 | 2:9,033,143-9,036,791 | - | C2H2g07149 | CX2g020846 | LOC_Os02g17150 | Os02g0270900 | - | Detail |
| C1H2g19197 | 2:9,040,474-9,040,841 | - | C2H2g23192 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |