| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00567 | 2:8,817,247-8,818,441 | + | C2H2g28348 | CX2g024567 | LOC_Os02g16730 | Os02g0267200 | - | Detail |
| C1H2g11320 | 2:8,833,313-8,833,760 | - | C2H2g17663 | CX2g023694 | - | - | - | Detail |
| C1H2g13618 | 2:8,855,606-8,856,506 | + | C2H2g24106 | CX2g021537 | LOC_Os02g16780 | Os02g0267700 | - | Detail |
| C1H2g11522 | 2:8,858,119-8,858,892 | - | C2H2g13728 | - | - | - | - | Detail |
| C1H2g05781 | 2:8,860,618-8,861,558 | + | C2H2g12202 | CX2g021537 | LOC_Os02g16800 | Os02g0267900 | - | Detail |
| C1H2g02783 | 2:8,872,276-8,873,203 | + | C2H2g00442 | CX2g023868 | LOC_Os02g16809 | Os02g0268400 | - | Detail |
| C1H2g00742 | 2:8,874,359-8,876,195 | + | C2H2g01503 | CX2g024471 | LOC_Os02g16830 | Os02g0268300 | - | Detail |
| C1H2g02775 | 2:8,879,966-8,881,353 | - | C2H2g15009 | CX2g023868 | LOC_Os02g16830 | Os02g0268300 | - | Detail |
| C1H2g04174 | 2:8,882,959-8,883,889 | - | C2H2g14228 | CX2g022143 | LOC_Os02g16809 | Os02g0268400 | - | Detail |
| C1H2g24493 | 2:8,891,603-8,892,723 | - | C2H2g09405 | CX2g021658 | LOC_Os02g16850 | Os02g0268600 | - | Detail |
| C1H2g31551 | 2:8,904,162-8,909,740 | - | C2H2g26499 | CX2g020063 | LOC_Os02g16880 | Os02g0269000 | - | Detail |
| C1H2g26008 | 2:8,928,081-8,928,486 | + | C2H2g29316 | CX2g020222 | LOC_Os02g16909 | Os02g0269200 | - | Detail |
| C1H2g18126 | 2:8,937,308-8,943,168 | - | C2H2g01546 | CX2g020252 | LOC_Os02g16940 | Os02g0269600 | - | Detail |
| C1H2g15972 | 2:8,960,463-8,960,663 | - | - | CX2g020056 | - | - | - | Detail |
| C1H2g08821 | 2:8,960,695-8,961,303 | - | C2H2g29172 | CX2g020275 | - | - | - | Detail |
| C1H2g11770 | 2:8,971,557-8,974,660 | - | - | - | - | - | - | Detail |
| C1H2g08764 | 2:8,980,387-8,984,436 | - | C2H2g07149 | CX2g022614 | LOC_Os02g17000 | Os02g0270800 | - | Detail |
| C1H2g02863 | 2:9,022,032-9,025,233 | - | C2H2g12321 | CX2g022614 | LOC_Os02g17150 | Os02g0270200 | - | Detail |
| C1H2g01288 | 2:9,033,143-9,036,791 | - | C2H2g07149 | CX2g020846 | LOC_Os02g17150 | Os02g0270900 | - | Detail |
| C1H2g19197 | 2:9,040,474-9,040,841 | - | C2H2g23192 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29981 | 5:21,291,258-21,291,632 | - | C1H5g03468 | - | LOC_Os05g43660 | Os05g0512301 | - | Detail |
| C2H5g13083 | 5:21,294,840-21,296,657 | - | C1H5g20040 | CX5g040726 | LOC_Os05g43670 | Os05g0512400 | - | Detail |
| C2H5g21303 | 5:21,297,654-21,300,340 | - | C1H5g16936 | - | LOC_Os05g43680 | Os05g0512500 | OsMRGBP | Detail |
| C2H5g03611 | 5:21,303,843-21,306,205 | + | C1H5g08173 | CX5g037888 | LOC_Os05g43690 | Os05g0512600 | - | Detail |
| C2H5g16900 | 5:21,320,767-21,323,227 | + | C1H5g02984 | CX5g039008 | LOC_Os05g43760 | Os05g0513100 | - | Detail |
| C2H5g24258 | 5:21,331,364-21,336,617 | + | C1H5g10552 | CX5g040071 | LOC_Os05g43770 | Os05g0513200 | - | Detail |
| C2H5g09149 | 5:21,338,727-21,341,608 | + | C1H5g13302 | CX5g039684 | LOC_Os05g43780 | Os05g0513350 | - | Detail |
| C2H5g26918 | 5:21,343,009-21,346,539 | + | C1H5g09663 | CX5g038930 | LOC_Os05g43790 | Os05g0513400 | - | Detail |
| C2H5g05557 | 5:21,350,747-21,352,114 | - | C1H5g15162 | CX5g036821 | LOC_Os05g43800 | Os05g0513600 | - | Detail |
| C2H5g13727 | 5:21,352,649-21,355,127 | - | C1H5g20443 | CX5g036949 | LOC_Os05g43810 | Os05g0513700 | - | Detail |
| C2H5g12600 | 5:21,358,927-21,360,693 | + | C1H5g18479 | CX5g036780 | LOC_Os05g43820 | Os05g0513800 | - | Detail |
| C2H5g13306 | 5:21,361,085-21,364,798 | - | C1H5g21593 | CX5g040516 | LOC_Os05g43830 | Os05g0513900 | - | Detail |
| C2H5g05539 | 5:21,369,293-21,370,828 | + | C1H5g29251 | CX5g039381 | LOC_Os05g43840 | Os05g0514200 | - | Detail |
| C2H5g17185 | 5:21,377,073-21,381,664 | + | C1H5g31291 | CX5g039707 | LOC_Os05g43850 | Os05g0514300 | - | Detail |
| C2H5g21883 | 5:21,383,909-21,386,056 | - | C1H5g31864 | CX5g039655 | LOC_Os05g43860 | Os05g0514400 | - | Detail |
| C2H5g27546 | 5:21,388,735-21,390,880 | + | C1H5g13883 | CX5g039558 | LOC_Os05g43870 | Os05g0514500 | - | Detail |
| C2H5g19387 | 5:21,395,993-21,397,147 | - | C1H5g27703 | CX5g037140 | LOC_Os05g43880 | Os05g0514600 | GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4 | Detail |
| C2H5g15452 | 5:21,409,934-21,410,179 | + | C1H5g12361 | CX5g039348 | LOC_Os05g43895 | Os05g0514800 | - | Detail |
| C2H5g22372 | 5:21,419,896-21,428,485 | + | C1H5g18846 | CX5g037416 | LOC_Os05g43910 | Os05g0515200 | - | Detail |
| C2H5g05053 | 5:21,437,495-21,442,944 | + | C1H5g31857 | CX5g037729 | LOC_Os05g43920 | Os05g0515400 | OsARF14, OsARF3la, OsARF3la/OsARF14 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |