| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17879 | 2:8,415,095-8,417,968 | - | C2H2g08854 | CX2g020140 | LOC_Os02g15760 | Os02g0257500 | OsSPCH2 | Detail |
| C1H2g13138 | 2:8,440,752-8,440,994 | - | - | - | - | - | - | Detail |
| C1H2g10499 | 2:8,450,606-8,455,969 | - | - | - | LOC_Os02g15790 | - | - | Detail |
| C1H2g24912 | 2:8,460,479-8,460,907 | + | - | CX2g019754 | LOC_Os02g15800 | Os02g0258000 | - | Detail |
| C1H2g08552 | 2:8,479,979-8,481,684 | - | C2H2g26210 | CX2g020807 | LOC_Os02g15810 | Os02g0258200 | - | Detail |
| C1H2g19748 | 2:8,482,646-8,483,071 | + | C2H1g29748 | CX2g022355 | - | Os02g0187700 | Os2R_MYB22 | Detail |
| C1H2g01345 | 2:8,484,414-8,489,802 | - | C2H2g14268 | CX2g021130 | LOC_Os02g15820 | Os02g0258300 | - | Detail |
| C1H2g29798 | 2:8,513,049-8,513,324 | + | C2H2g28678 | CX2g024305 | LOC_Os02g15860 | Os02g0258800 | - | Detail |
| C1H2g20084 | 2:8,516,059-8,519,540 | - | C2H2g14628 | CX2g022221 | LOC_Os02g15870 | Os02g0258900 | - | Detail |
| C1H2g13918 | 2:8,522,755-8,524,650 | - | - | CX2g020163 | LOC_Os02g15880 | Os02g0259100 | - | Detail |
| C1H2g15544 | 2:8,543,405-8,545,255 | - | C2H2g14089 | CX2g024280 | LOC_Os02g15900 | Os02g0259600 | - | Detail |
| C1H2g10789 | 2:8,551,763-8,552,161 | + | - | - | - | - | - | Detail |
| C1H2g04256 | 2:8,554,093-8,560,341 | + | C2H2g22829 | CX2g024539 | LOC_Os02g15930 | Os02g0259850 | - | Detail |
| C1H2g03338 | 2:8,578,273-8,580,594 | + | C2H2g09217 | CX2g022291 | LOC_Os02g15950 | Os02g0260200 | EP3, LP | Detail |
| C1H2g02864 | 2:8,601,861-8,605,657 | - | C2H2g12926 | CX2g021533 | LOC_Os02g15970 | Os02g0260400 | - | Detail |
| C1H2g27751 | 2:8,614,036-8,617,836 | + | C2H2g06594 | CX2g022911 | LOC_Os02g15980 | Os02g0260500 | - | Detail |
| C1H2g12308 | 2:8,623,315-8,628,321 | + | C2H2g13675 | CX2g024506 | LOC_Os02g16000 | Os02g0260700 | - | Detail |
| C1H2g28079 | 2:8,636,613-8,640,704 | + | C2H2g11255 | CX2g022743 | LOC_Os02g16030 | Os02g0261000 | - | Detail |
| C1H2g29991 | 2:8,644,610-8,649,650 | + | C2H2g01960 | CX2g019327 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| C1H2g07409 | 2:8,669,727-8,671,447 | + | C2H2g29016 | CX2g022234 | LOC_Os02g16270 | Os02g0262800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g12265 | 3:17,761,916-17,768,943 | - | C1H3g14005 | CX3g028089 | LOC_Os03g34300 | Os03g0454100 | - | Detail |
| C2H3g25407 | 3:17,769,468-17,773,419 | + | - | - | LOC_Os03g34310 | - | - | Detail |
| C2H3g24060 | 3:17,834,168-17,844,265 | + | C1H3g30334 | CX3g029528 | - | Os03g0678400 | - | Detail |
| C2H3g17975 | 3:17,960,208-17,963,228 | + | C1H3g23806 | CX3g026576 | - | Os03g0759000 | - | Detail |
| C2H3g10346 | 3:18,090,172-18,105,947 | - | C1H3g18625 | CX3g027364 | LOC_Os03g35340 | Os03g0554900 | - | Detail |
| C2H3g04971 | 3:18,121,785-18,122,528 | - | C1H3g29658 | CX3g026045 | LOC_Os03g35370 | - | - | Detail |
| C2H3g05979 | 3:18,133,225-18,137,648 | - | C1H3g29570 | - | LOC_Os03g35454 | - | - | Detail |
| C2H3g12208 | 3:18,173,644-18,176,508 | + | C1H3g05847 | CX3g030899 | - | - | - | Detail |
| C2H3g23939 | 3:18,219,475-18,223,831 | + | C1H3g05109 | CX3g026628 | LOC_Os03g35600 | Os03g0556600 | SDRLK-20 | Detail |
| C2H3g16484 | 3:18,270,845-18,271,739 | - | C1H3g27683 | - | LOC_Os03g35620 | - | - | Detail |
| C2H3g10319 | 3:18,271,784-18,272,125 | - | - | CX3g031176 | - | - | - | Detail |
| C2H3g20317 | 3:18,272,142-18,272,912 | - | C1H3g27683 | - | LOC_Os03g35620 | - | - | Detail |
| C2H3g12177 | 3:18,361,798-18,362,366 | + | - | - | - | Os03g0558600 | - | Detail |
| C2H3g08461 | 3:18,633,763-18,634,880 | - | C1H3g18372 | CX3g026625 | LOC_Os03g36439 | Os03g0562200 | - | Detail |
| C2H3g19324 | 3:18,646,026-18,646,409 | - | C1H3g09057 | CX3g025527 | - | Os03g0562200 | - | Detail |
| C2H3g18751 | 3:18,698,011-18,702,063 | + | C1H3g31570 | CX3g030881 | LOC_Os03g36530 | Os03g0563100 | - | Detail |
| C2H3g06195 | 3:18,706,359-18,707,995 | - | C1H3g17857 | CX3g027657 | LOC_Os03g36540 | Os03g0563300 | ELL, OsCHLI | Detail |
| C2H3g17553 | 3:18,721,989-18,724,706 | + | C1H3g29929 | CX3g025994 | LOC_Os03g36560 | Os03g0563600 | - | Detail |
| C2H3g01598 | 3:18,725,336-18,725,832 | + | C1H3g19117 | CX3g025994 | LOC_Os03g36560 | Os03g0563600 | - | Detail |
| C2H3g26291 | 3:18,758,458-18,763,960 | + | C1H3g27327 | CX3g025101 | LOC_Os03g36630 | Os03g0564200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |