| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17879 | 2:8,415,095-8,417,968 | - | C2H2g08854 | CX2g020140 | LOC_Os02g15760 | Os02g0257500 | OsSPCH2 | Detail |
| C1H2g13138 | 2:8,440,752-8,440,994 | - | - | - | - | - | - | Detail |
| C1H2g10499 | 2:8,450,606-8,455,969 | - | - | - | LOC_Os02g15790 | - | - | Detail |
| C1H2g24912 | 2:8,460,479-8,460,907 | + | - | CX2g019754 | LOC_Os02g15800 | Os02g0258000 | - | Detail |
| C1H2g08552 | 2:8,479,979-8,481,684 | - | C2H2g26210 | CX2g020807 | LOC_Os02g15810 | Os02g0258200 | - | Detail |
| C1H2g19748 | 2:8,482,646-8,483,071 | + | C2H1g29748 | CX2g022355 | - | Os02g0187700 | Os2R_MYB22 | Detail |
| C1H2g01345 | 2:8,484,414-8,489,802 | - | C2H2g14268 | CX2g021130 | LOC_Os02g15820 | Os02g0258300 | - | Detail |
| C1H2g29798 | 2:8,513,049-8,513,324 | + | C2H2g28678 | CX2g024305 | LOC_Os02g15860 | Os02g0258800 | - | Detail |
| C1H2g20084 | 2:8,516,059-8,519,540 | - | C2H2g14628 | CX2g022221 | LOC_Os02g15870 | Os02g0258900 | - | Detail |
| C1H2g13918 | 2:8,522,755-8,524,650 | - | - | CX2g020163 | LOC_Os02g15880 | Os02g0259100 | - | Detail |
| C1H2g15544 | 2:8,543,405-8,545,255 | - | C2H2g14089 | CX2g024280 | LOC_Os02g15900 | Os02g0259600 | - | Detail |
| C1H2g10789 | 2:8,551,763-8,552,161 | + | - | - | - | - | - | Detail |
| C1H2g04256 | 2:8,554,093-8,560,341 | + | C2H2g22829 | CX2g024539 | LOC_Os02g15930 | Os02g0259850 | - | Detail |
| C1H2g03338 | 2:8,578,273-8,580,594 | + | C2H2g09217 | CX2g022291 | LOC_Os02g15950 | Os02g0260200 | EP3, LP | Detail |
| C1H2g02864 | 2:8,601,861-8,605,657 | - | C2H2g12926 | CX2g021533 | LOC_Os02g15970 | Os02g0260400 | - | Detail |
| C1H2g27751 | 2:8,614,036-8,617,836 | + | C2H2g06594 | CX2g022911 | LOC_Os02g15980 | Os02g0260500 | - | Detail |
| C1H2g12308 | 2:8,623,315-8,628,321 | + | C2H2g13675 | CX2g024506 | LOC_Os02g16000 | Os02g0260700 | - | Detail |
| C1H2g28079 | 2:8,636,613-8,640,704 | + | C2H2g11255 | CX2g022743 | LOC_Os02g16030 | Os02g0261000 | - | Detail |
| C1H2g29991 | 2:8,644,610-8,649,650 | + | C2H2g01960 | CX2g019327 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| C1H2g07409 | 2:8,669,727-8,671,447 | + | C2H2g29016 | CX2g022234 | LOC_Os02g16270 | Os02g0262800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g14674 | 12:14,730,415-14,730,684 | + | C1H6g30328 | CX12g016633 | LOC_Os06g39370 | Os06g0594400 | OsKMD2, OsFBK16 | Detail |
| C2H12g10117 | 12:14,738,891-14,739,409 | + | C1H12g30300 | CX12g016151 | LOC_Os12g28880 | Os12g0473900 | OsHyPRP45 | Detail |
| C2H12g21343 | 12:14,754,897-14,756,014 | + | - | - | - | - | - | Detail |
| C2H12g28218 | 12:14,816,608-14,819,315 | - | C1H12g28285 | CX12g016814 | LOC_Os12g29220 | Os12g0476200 | SWEET13, OsSWEET13 | Detail |
| C2H12g15425 | 12:14,888,618-14,891,065 | + | C1H12g31115 | CX12g017996 | LOC_Os12g29280 | Os12g0477000 | - | Detail |
| C2H12g01509 | 12:14,899,237-14,900,932 | - | C1H12g21315 | - | - | Os12g0477050 | - | Detail |
| C2H12g12135 | 12:14,911,410-14,912,267 | + | C1H12g07587 | CX12g016621 | LOC_Os12g29330 | Os12g0477400 | - | Detail |
| C2H12g11395 | 12:14,927,413-14,935,078 | - | C1H12g12648 | CX12g017275 | - | - | - | Detail |
| C2H12g17196 | 12:14,938,486-14,947,609 | - | C1H12g22288 | CX12g017166 | LOC_Os12g29350 | Os12g0477700 | - | Detail |
| C2H12g03246 | 12:14,968,262-14,969,888 | - | C1H12g13264 | CX12g017957 | LOC_Os12g29400 | - | - | Detail |
| C2H12g10440 | 12:14,985,779-14,988,562 | + | C1H12g24621 | CX12g018371 | LOC_Os12g29430 | Os12g0478400 | - | Detail |
| C2H12g04175 | 12:15,005,215-15,005,634 | - | C1H12g21784 | CX12g018080 | LOC_Os12g29450 | - | - | Detail |
| C2H12g10949 | 12:15,027,736-15,028,392 | + | C1H12g20599 | CX12g018113 | LOC_Os12g29480 | Os12g0478900 | - | Detail |
| C2H12g13424 | 12:15,034,422-15,035,533 | - | C1H12g00537 | - | - | - | - | Detail |
| C2H12g12179 | 12:15,049,539-15,051,001 | - | C1H12g10683 | CX12g015373 | LOC_Os12g29500 | Os12g0479100 | - | Detail |
| C2H12g13022 | 12:15,077,857-15,083,842 | - | C1H12g11280 | CX12g017952 | LOC_Os12g29520 | Os12g0479400 | - | Detail |
| C2H12g24396 | 12:15,112,962-15,119,341 | + | C1H12g26255 | CX12g017373 | LOC_Os12g29550 | Os12g0479900 | - | Detail |
| C2H12g19344 | 12:15,120,069-15,124,549 | + | C1H12g19180 | CX12g018470 | LOC_Os12g29560 | Os12g0480000 | OsDHHC30 | Detail |
| C2H12g22844 | 12:15,125,272-15,125,846 | + | C1H12g17150 | CX12g017916 | LOC_Os12g29570 | Os12g0480100 | - | Detail |
| C2H12g24381 | 12:15,128,759-15,133,181 | - | C1H12g26749 | CX12g016037 | LOC_Os12g29580 | Os12g0480200 | OsAGC24 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |