| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g06662 | 2:7,991,663-7,992,364 | - | C2H2g07505 | CX2g023170 | LOC_Os02g15020 | Os02g0248200 | - | Detail |
| C1H2g18782 | 2:7,994,232-8,003,619 | + | C2H2g07284 | - | LOC_Os02g15030 | - | - | Detail |
| C1H2g16853 | 2:8,010,944-8,011,597 | - | C2H2g16607 | CX2g020098 | LOC_Os02g15060 | Os02g0248440 | - | Detail |
| C1H2g09152 | 2:8,012,506-8,013,135 | - | C2H2g16607 | CX2g020098 | LOC_Os02g15080 | Os02g0178600 | - | Detail |
| C1H2g03589 | 2:8,014,746-8,016,486 | - | C2H2g25041 | CX2g019611 | LOC_Os02g15070 | Os02g0248800 | - | Detail |
| C1H2g22435 | 2:8,020,152-8,021,966 | - | C2H2g29377 | CX2g019611 | LOC_Os02g15090 | Os02g0249000 | GLUD1, GluD1, GluD-1, OsEnS-33 | Detail |
| C1H2g10994 | 2:8,024,776-8,025,351 | - | C2H2g18111 | CX2g023170 | LOC_Os02g15100 | Os02g0178600 | - | Detail |
| C1H2g26668 | 2:8,030,462-8,030,947 | - | C2H2g03573 | CX2g021366 | LOC_Os02g15110 | Os02g0249200 | - | Detail |
| C1H2g19472 | 2:8,035,232-8,035,834 | + | C2H2g18111 | CX2g020218 | LOC_Os02g15120 | Os02g0249300 | - | Detail |
| C1H2g14225 | 2:8,043,657-8,047,675 | + | C2H2g29796 | CX2g024165 | LOC_Os02g15140 | Os02g0249500 | - | Detail |
| C1H2g15797 | 2:8,054,028-8,055,782 | + | C2H2g20324 | CX2g019532 | LOC_Os02g15150 | Os02g0249600 | - | Detail |
| C1H2g31875 | 2:8,061,343-8,063,213 | - | C2H2g27895 | CX2g020506 | LOC_Os02g15160 | Os02g0249700 | - | Detail |
| C1H2g23896 | 2:8,073,796-8,075,615 | + | C2H2g30056 | CX2g019611 | LOC_Os02g15169 | Os02g0249800 | - | Detail |
| C1H2g06356 | 2:8,095,101-8,097,398 | + | C2H2g17924 | CX2g022131 | LOC_Os02g15220 | Os02g0250300 | OsGTE4 | Detail |
| C1H2g12357 | 2:8,105,901-8,109,391 | + | C2H2g13396 | CX2g022354 | LOC_Os02g15230 | Os02g0250400 | BS1, OsGELP33 | Detail |
| C1H2g12228 | 2:8,114,878-8,116,710 | - | - | CX2g023213 | LOC_Os02g15250 | Os02g0250600 | - | Detail |
| C1H2g07509 | 2:8,130,100-8,134,876 | - | C2H2g03256 | CX2g022128 | - | - | - | Detail |
| C1H2g16469 | 2:8,135,686-8,136,525 | + | C2H2g19821 | CX2g023206 | LOC_Os02g15270 | Os02g0251700 | - | Detail |
| C1H2g31562 | 2:8,138,167-8,138,493 | - | - | CX6g044448 | LOC_Os02g15280 | Os02g0251800 | - | Detail |
| C1H2g26853 | 2:8,140,529-8,140,915 | - | - | CX6g044448 | LOC_Os02g15290 | Os02g0251900 | OsVQ7 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g13826 | 3:11,965,481-11,968,360 | - | C1H3g21571 | CX3g031321 | LOC_Os03g23980 | Os03g0355900 | - | Detail |
| C2H3g28171 | 3:11,978,447-11,980,950 | - | C1H3g12783 | CX3g028805 | LOC_Os03g24020 | Os03g0356300 | - | Detail |
| C2H3g25986 | 3:11,982,082-11,982,693 | + | C1H3g13830 | CX3g029294 | LOC_Os03g24030 | Os03g0356400 | - | Detail |
| C2H3g03916 | 3:11,984,572-11,988,270 | - | C1H3g04093 | CX3g029486 | LOC_Os03g24040 | Os03g0356414 | OsDIS1, RIP5 | Detail |
| C2H3g11837 | 3:11,998,759-12,001,752 | - | C1H3g10870 | CX3g028879 | LOC_Os03g24060 | Os03g0356484 | - | Detail |
| C2H3g26682 | 3:12,010,868-12,013,801 | + | C1H3g31470 | CX3g029746 | LOC_Os03g24070 | Os03g0356498 | - | Detail |
| C2H3g08808 | 3:12,038,841-12,043,312 | + | C1H3g17743 | CX3g025443 | LOC_Os03g24160 | Os03g0356582 | - | Detail |
| C2H3g17773 | 3:12,043,586-12,049,024 | + | C1H3g08944 | CX3g026195 | LOC_Os03g24170 | Os03g0356596 | - | Detail |
| C2H3g23180 | 3:12,051,002-12,062,618 | - | C1H3g10425 | CX3g030641 | LOC_Os03g24180 | Os03g0356638 | - | Detail |
| C2H3g21028 | 3:12,067,929-12,072,098 | - | C1H3g18732 | - | LOC_Os03g24184 | Os03g0356652 | - | Detail |
| C2H3g17361 | 3:12,078,207-12,087,485 | - | C1H3g13461 | CX3g027125 | - | - | - | Detail |
| C2H3g17190 | 3:12,098,715-12,110,586 | + | C1H3g23838 | CX3g026980 | LOC_Os03g24220 | Os03g0356700 | - | Detail |
| C2H3g24623 | 3:12,137,392-12,138,207 | - | - | CX3g030376 | LOC_Os03g24300 | Os03g0357500 | - | Detail |
| C2H3g04618 | 3:12,140,196-12,156,743 | - | C1H3g26654 | CX3g025978 | LOC_Os03g24339 | Os03g0358000 | - | Detail |
| C2H3g25339 | 3:12,163,365-12,166,606 | + | C1H3g20604 | CX3g027667 | LOC_Os03g24380 | Os03g0358100 | OsPHGPX | Detail |
| C2H3g18105 | 3:12,168,115-12,171,739 | - | C1H3g25429 | CX3g026378 | LOC_Os03g24390 | Os03g0358200 | - | Detail |
| C2H3g29820 | 3:12,199,864-12,201,366 | + | C1H3g03806 | CX3g027747 | LOC_Os03g24430 | Os03g0358800 | - | Detail |
| C2H3g02173 | 3:12,202,614-12,202,911 | + | C1H3g03929 | - | - | - | - | Detail |
| C2H3g26481 | 3:12,209,283-12,216,847 | - | C1H3g20488 | CX3g029410 | LOC_Os03g24450 | Os03g0359000 | - | Detail |
| C2H3g19566 | 3:12,228,015-12,235,672 | - | C1H3g24369 | CX3g028360 | LOC_Os03g24460 | Os03g0359100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |