| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g31704 | 2:6,713,694-6,716,892 | + | C2H2g04766 | CX2g023577 | LOC_Os02g13340 | Os02g0226900 | - | Detail |
| C1H2g11270 | 2:6,724,728-6,728,994 | + | C2H2g20793 | CX2g022100 | LOC_Os02g13360 | Os02g0227000 | - | Detail |
| C1H2g06292 | 2:6,729,844-6,730,986 | - | C2H2g16446 | CX2g024391 | LOC_Os02g13370 | Os02g0227100 | - | Detail |
| C1H2g27279 | 2:6,733,156-6,735,390 | - | C2H2g09582 | CX2g023589 | LOC_Os02g13380 | Os02g0227200 | - | Detail |
| C1H2g17086 | 2:6,737,658-6,743,563 | + | C2H2g07399 | CX2g023337 | LOC_Os02g13400 | Os02g0227400 | - | Detail |
| C1H2g08528 | 2:6,746,099-6,746,786 | - | C2H2g19169 | - | LOC_Os02g13450 | - | - | Detail |
| C1H2g27344 | 2:6,753,777-6,757,063 | - | C2H2g27180 | CX2g024122 | LOC_Os02g13430 | Os02g0227700 | - | Detail |
| C1H2g21596 | 2:6,758,180-6,759,826 | - | C2H2g25704 | - | LOC_Os02g13450 | - | - | Detail |
| C1H2g25417 | 2:6,769,204-6,771,173 | - | C2H2g03228 | CX2g024892 | LOC_Os02g13430 | Os02g0227900 | - | Detail |
| C1H2g24817 | 2:6,777,324-6,778,901 | - | C2H2g18799 | CX2g023289 | LOC_Os02g13460 | Os02g0228000 | - | Detail |
| C1H2g25235 | 2:6,790,144-6,793,447 | - | C2H2g13441 | CX2g023289 | LOC_Os02g13510 | Os02g0228300 | - | Detail |
| C1H2g23289 | 2:6,808,436-6,808,792 | - | C2H2g22462 | CX2g023224 | - | Os02g0228600 | - | Detail |
| C1H2g05556 | 2:6,810,117-6,810,632 | - | - | CX2g022459 | - | Os02g0632700 | - | Detail |
| C1H2g16622 | 2:6,812,634-6,815,719 | - | C2H2g05217 | CX2g021147 | LOC_Os02g13520 | Os02g0228900 | - | Detail |
| C1H2g12806 | 2:6,824,635-6,826,171 | - | C2H2g15583 | CX6g045470 | LOC_Os02g13530 | Os02g0229000 | - | Detail |
| C1H2g14306 | 2:6,844,116-6,849,453 | + | C2H2g07545 | CX2g018941 | LOC_Os02g13560 | Os02g0229400 | - | Detail |
| C1H2g11910 | 2:6,850,543-6,856,919 | - | C2H2g14867 | CX2g021414 | LOC_Os02g13570 | Os02g0229600 | - | Detail |
| C1H2g14760 | 2:6,865,684-6,866,571 | + | - | CX2g021151 | LOC_Os02g13600 | Os02g0229800 | - | Detail |
| C1H2g17062 | 2:6,873,391-6,873,942 | + | - | CX2g018883 | LOC_Os02g13620 | Os02g0229900 | - | Detail |
| C1H2g15938 | 2:6,875,107-6,876,295 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24146 | 3:902,277-905,502 | + | C1H3g21463 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C2H3g12012 | 3:905,885-908,766 | - | C1H3g16632 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C2H3g14284 | 3:910,317-914,198 | - | C1H3g08934 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| C2H3g02407 | 3:923,819-927,470 | - | C1H3g03441 | CX3g026290 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| C2H3g11600 | 3:929,349-930,854 | - | C1H3g10934 | CX3g025360 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| C2H3g16408 | 3:944,013-947,894 | + | C1H3g08539 | CX3g028149 | LOC_Os03g02890 | Os03g0120800 | - | Detail |
| C2H3g18948 | 3:960,186-961,118 | + | C1H3g19352 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C2H3g18738 | 3:978,379-982,304 | - | C1H3g28264 | CX3g025034 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| C2H3g23557 | 3:984,957-986,513 | - | C1H3g20047 | CX3g026688 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| C2H3g04065 | 3:993,230-994,504 | + | C1H3g01141 | CX3g025202 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| C2H3g16968 | 3:994,604-1,003,811 | - | C1H3g02111 | CX3g027774 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| C2H3g23905 | 3:1,015,206-1,021,163 | + | C1H3g23785 | CX3g028931 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| C2H3g27024 | 3:1,028,901-1,029,277 | + | C1H3g05090 | - | - | - | - | Detail |
| C2H3g24994 | 3:1,029,464-1,032,408 | + | C1H3g07706 | CX3g026004 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| C2H3g11967 | 3:1,035,229-1,037,122 | - | C1H3g24387 | CX3g025069 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| C2H3g05774 | 3:1,038,204-1,043,973 | - | C1H3g05611 | CX3g031243 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| C2H3g15040 | 3:1,057,763-1,062,339 | - | C1H3g26838 | CX3g027036 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| C2H3g28462 | 3:1,082,037-1,083,831 | - | C1H3g04456 | CX3g025481 | LOC_Os03g03100 | Os03g0834466 | - | Detail |
| C2H3g16267 | 3:1,095,728-1,096,384 | + | C1H3g18665 | CX3g031045 | - | - | - | Detail |
| C2H3g19854 | 3:1,097,016-1,100,081 | + | C1H3g16789 | CX3g030103 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |