| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g31704 | 2:6,713,694-6,716,892 | + | C2H2g04766 | CX2g023577 | LOC_Os02g13340 | Os02g0226900 | - | Detail |
| C1H2g11270 | 2:6,724,728-6,728,994 | + | C2H2g20793 | CX2g022100 | LOC_Os02g13360 | Os02g0227000 | - | Detail |
| C1H2g06292 | 2:6,729,844-6,730,986 | - | C2H2g16446 | CX2g024391 | LOC_Os02g13370 | Os02g0227100 | - | Detail |
| C1H2g27279 | 2:6,733,156-6,735,390 | - | C2H2g09582 | CX2g023589 | LOC_Os02g13380 | Os02g0227200 | - | Detail |
| C1H2g17086 | 2:6,737,658-6,743,563 | + | C2H2g07399 | CX2g023337 | LOC_Os02g13400 | Os02g0227400 | - | Detail |
| C1H2g08528 | 2:6,746,099-6,746,786 | - | C2H2g19169 | - | LOC_Os02g13450 | - | - | Detail |
| C1H2g27344 | 2:6,753,777-6,757,063 | - | C2H2g27180 | CX2g024122 | LOC_Os02g13430 | Os02g0227700 | - | Detail |
| C1H2g21596 | 2:6,758,180-6,759,826 | - | C2H2g25704 | - | LOC_Os02g13450 | - | - | Detail |
| C1H2g25417 | 2:6,769,204-6,771,173 | - | C2H2g03228 | CX2g024892 | LOC_Os02g13430 | Os02g0227900 | - | Detail |
| C1H2g24817 | 2:6,777,324-6,778,901 | - | C2H2g18799 | CX2g023289 | LOC_Os02g13460 | Os02g0228000 | - | Detail |
| C1H2g25235 | 2:6,790,144-6,793,447 | - | C2H2g13441 | CX2g023289 | LOC_Os02g13510 | Os02g0228300 | - | Detail |
| C1H2g23289 | 2:6,808,436-6,808,792 | - | C2H2g22462 | CX2g023224 | - | Os02g0228600 | - | Detail |
| C1H2g05556 | 2:6,810,117-6,810,632 | - | - | CX2g022459 | - | Os02g0632700 | - | Detail |
| C1H2g16622 | 2:6,812,634-6,815,719 | - | C2H2g05217 | CX2g021147 | LOC_Os02g13520 | Os02g0228900 | - | Detail |
| C1H2g12806 | 2:6,824,635-6,826,171 | - | C2H2g15583 | CX6g045470 | LOC_Os02g13530 | Os02g0229000 | - | Detail |
| C1H2g14306 | 2:6,844,116-6,849,453 | + | C2H2g07545 | CX2g018941 | LOC_Os02g13560 | Os02g0229400 | - | Detail |
| C1H2g11910 | 2:6,850,543-6,856,919 | - | C2H2g14867 | CX2g021414 | LOC_Os02g13570 | Os02g0229600 | - | Detail |
| C1H2g14760 | 2:6,865,684-6,866,571 | + | - | CX2g021151 | LOC_Os02g13600 | Os02g0229800 | - | Detail |
| C1H2g17062 | 2:6,873,391-6,873,942 | + | - | CX2g018883 | LOC_Os02g13620 | Os02g0229900 | - | Detail |
| C1H2g15938 | 2:6,875,107-6,876,295 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17329 | 1:37,088,803-37,091,952 | - | C1H1g24211 | CX1g003977 | LOC_Os01g72090 | Os01g0949400 | - | Detail |
| C2H1g28530 | 1:37,103,859-37,104,899 | + | C1H1g07252 | CX1g001038 | LOC_Os01g72120 | Os01g0949700 | - | Detail |
| C2H1g18539 | 1:37,105,416-37,106,206 | + | C1H1g22384 | CX1g001038 | LOC_Os01g72130 | Os01g0949750 | - | Detail |
| C2H1g25830 | 1:37,108,958-37,110,117 | + | C1H1g30242 | CX1g001038 | LOC_Os01g72140 | Os01g0949800 | - | Detail |
| C2H1g25821 | 1:37,111,400-37,112,205 | + | C1H1g00771 | CX1g001038 | LOC_Os01g72150 | Os01g0949800 | - | Detail |
| C2H1g04599 | 1:37,112,680-37,113,452 | + | C1H1g09413 | CX1g001038 | LOC_Os01g72160 | Os01g0950000 | - | Detail |
| C2H1g22758 | 1:37,115,808-37,116,527 | + | C1H1g16006 | CX1g001038 | LOC_Os01g72170 | Os01g0950000 | - | Detail |
| C2H1g19803 | 1:37,121,442-37,122,892 | + | C1H1g15694 | CX1g001087 | LOC_Os01g72190 | - | - | Detail |
| C2H1g09890 | 1:37,127,079-37,129,224 | - | C1H1g27599 | CX1g000649 | LOC_Os01g72205 | Os01g0950866 | - | Detail |
| C2H1g20439 | 1:37,129,563-37,133,243 | + | C1H1g26489 | CX1g006637 | LOC_Os01g72210 | Os01g0950900 | - | Detail |
| C2H1g27207 | 1:37,133,523-37,140,278 | - | C1H1g26405 | CX1g001273 | LOC_Os01g72220 | Os01g0951000 | OsFY | Detail |
| C2H1g23592 | 1:37,143,195-37,145,666 | + | C1H1g21234 | CX1g004320 | LOC_Os01g72230 | Os01g0951100 | - | Detail |
| C2H1g09816 | 1:37,147,027-37,150,242 | + | C1H1g03325 | CX1g004161 | LOC_Os01g72240 | Os01g0951200 | - | Detail |
| C2H1g13129 | 1:37,150,976-37,154,541 | + | C1H1g03325 | CX1g005185 | LOC_Os01g72250 | Os01g0951400 | - | Detail |
| C2H1g09971 | 1:37,161,784-37,164,922 | - | C1H1g24604 | CX1g006323 | LOC_Os01g72280 | Os01g0951800 | - | Detail |
| C2H1g11533 | 1:37,173,294-37,174,564 | + | C1H1g13711 | CX1g003867 | LOC_Os01g72290 | Os01g0952000 | - | Detail |
| C2H1g04145 | 1:37,180,918-37,182,059 | + | C1H1g12927 | CX1g000435 | LOC_Os01g72300 | Os01g0952100 | - | Detail |
| C2H1g17493 | 1:37,182,851-37,188,376 | + | C1H1g25821 | CX1g001457 | LOC_Os01g72310 | Os01g0952200 | - | Detail |
| C2H1g24796 | 1:37,188,749-37,196,074 | - | C1H1g12568 | CX1g004562 | LOC_Os01g72320 | Os01g0952300 | - | Detail |
| C2H1g17242 | 1:37,213,051-37,215,357 | + | C1H1g26383 | CX1g002915 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |