| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g03908 | 2:6,474,255-6,477,314 | + | C2H2g17422 | CX2g023753 | LOC_Os02g12910 | Os02g0222600 | - | Detail |
| C1H2g24351 | 2:6,523,717-6,524,421 | + | C2H2g08629 | CX2g021051 | LOC_Os02g13060 | Os02g0223700 | - | Detail |
| C1H2g15757 | 2:6,563,891-6,566,411 | + | C2H2g24144 | CX2g019831 | LOC_Os02g13100 | Os02g0224100 | - | Detail |
| C1H2g08066 | 2:6,572,294-6,580,216 | - | C2H2g03856 | CX2g018848 | LOC_Os02g13110 | Os02g0224200 | - | Detail |
| C1H2g24744 | 2:6,588,708-6,594,149 | + | C2H2g10494 | CX2g021841 | LOC_Os02g13130 | Os02g0224300 | - | Detail |
| C1H2g17132 | 2:6,595,072-6,603,401 | + | C2H2g14478 | CX2g019171 | LOC_Os02g13140 | Os02g0224400 | - | Detail |
| C1H2g26512 | 2:6,614,907-6,619,328 | + | C2H2g07309 | CX2g020820 | LOC_Os02g13150 | Os02g0224800 | - | Detail |
| C1H2g03138 | 2:6,621,242-6,626,399 | - | C2H2g08849 | CX2g019652 | LOC_Os02g13160 | Os02g0224900 | - | Detail |
| C1H2g19767 | 2:6,626,359-6,632,017 | + | C2H2g16941 | CX2g022426 | LOC_Os02g13170 | Os02g0225000 | - | Detail |
| C1H2g11782 | 2:6,632,586-6,633,188 | + | C2H2g16941 | CX2g020135 | LOC_Os02g13180 | Os02g0225100 | - | Detail |
| C1H2g24855 | 2:6,635,258-6,636,601 | - | C2H2g19154 | CX2g022887 | LOC_Os02g13190 | Os02g0225900 | - | Detail |
| C1H2g31635 | 2:6,641,011-6,643,022 | - | C2H2g02099 | - | LOC_Os02g13200 | Os02g0225300 | - | Detail |
| C1H2g16441 | 2:6,647,529-6,648,839 | - | C2H2g27091 | CX2g021635 | LOC_Os02g13220 | Os02g0225900 | - | Detail |
| C1H2g24185 | 2:6,655,689-6,656,993 | + | C2H2g27091 | CX2g023835 | LOC_Os02g13260 | Os02g0225900 | - | Detail |
| C1H2g29684 | 2:6,659,123-6,661,703 | - | C2H2g12882 | CX2g021885 | LOC_Os02g13270 | Os02g0226000 | - | Detail |
| C1H2g14093 | 2:6,676,199-6,677,173 | + | C2H2g26955 | CX2g021042 | LOC_Os02g13290 | Os02g0226200 | - | Detail |
| C1H2g01064 | 2:6,680,645-6,685,693 | + | C2H2g12216 | CX2g021388 | LOC_Os02g13300 | Os02g0226300 | - | Detail |
| C1H2g16170 | 2:6,686,424-6,687,398 | - | - | CX2g024662 | - | Os02g0226400 | - | Detail |
| C1H2g30402 | 2:6,695,214-6,697,708 | + | C2H2g15932 | CX2g020162 | LOC_Os02g13310 | Os02g0226600 | - | Detail |
| C1H2g00689 | 2:6,709,101-6,709,739 | - | C2H2g08544 | CX2g022029 | LOC_Os02g13330 | Os02g0226801 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24219 | 3:9,407,341-9,407,955 | + | C1H3g00497 | CX3g025566 | LOC_Os03g18990 | Os03g0301900 | - | Detail |
| C2H3g19658 | 3:9,410,763-9,411,527 | + | C1H3g25455 | - | LOC_Os03g19000 | Os03g0301950 | PEX11-2, OsPEX11-2, OsPEX11-5 | Detail |
| C2H3g01269 | 3:9,412,970-9,415,375 | + | C1H3g00671 | - | LOC_Os03g19010 | Os03g0302000 | PEX11-3, OsPEX11-3, OsPEX11 | Detail |
| C2H3g16033 | 3:9,416,864-9,420,075 | + | C1H3g25691 | CX3g029358 | LOC_Os03g19020 | Os03g0302200 | OsHIRP1 | Detail |
| C2H3g22160 | 3:9,425,813-9,426,652 | + | C1H3g01186 | CX3g025355 | LOC_Os03g19040 | Os03g0302500 | - | Detail |
| C2H3g04749 | 3:9,429,430-9,431,816 | + | C1H3g04602 | CX3g031208 | LOC_Os03g19059 | Os03g0302700 | - | Detail |
| C2H3g01569 | 3:9,433,708-9,434,355 | + | C1H3g22154 | CX3g027498 | LOC_Os03g19070 | Os03g0302800 | - | Detail |
| C2H3g02069 | 3:9,448,181-9,452,673 | + | C1H3g20481 | CX3g029770 | LOC_Os03g19080 | Os03g0302900 | SSD1 | Detail |
| C2H3g07365 | 3:9,456,527-9,457,600 | + | C1H3g20097 | CX3g030525 | LOC_Os03g19090 | Os03g0303100 | - | Detail |
| C2H3g09593 | 3:9,465,902-9,472,378 | - | C1H3g25874 | CX3g027281 | LOC_Os03g19120 | Os03g0303500 | OsP1 | Detail |
| C2H3g00606 | 3:9,492,656-9,493,476 | - | C1H3g30781 | CX3g028949 | LOC_Os03g19170 | Os03g0304100 | - | Detail |
| C2H3g12534 | 3:9,496,523-9,503,702 | + | C1H3g08647 | CX3g027589 | LOC_Os03g19190 | Os03g0304400 | - | Detail |
| C2H3g09070 | 3:9,516,974-9,520,456 | - | C1H3g21470 | CX3g026232 | LOC_Os03g19200 | Os03g0304500 | - | Detail |
| C2H3g20134 | 3:9,542,594-9,545,448 | - | C1H3g06043 | - | LOC_Os03g19220 | Os03g0304800 | - | Detail |
| C2H3g11777 | 3:9,555,282-9,559,401 | - | C1H3g10550 | CX3g026365 | LOC_Os03g19240 | Os03g0305000 | - | Detail |
| C2H3g17079 | 3:9,561,884-9,565,492 | - | C1H3g05747 | CX3g028640 | LOC_Os03g19250 | Os03g0305100 | - | Detail |
| C2H3g13465 | 3:9,570,078-9,570,716 | - | C1H3g00125 | CX3g029782 | LOC_Os03g19260 | Os03g0305200 | - | Detail |
| C2H3g28502 | 3:9,578,640-9,579,512 | - | C1H3g18796 | CX3g028201 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| C2H3g12913 | 3:9,582,082-9,586,519 | + | C1H3g22639 | CX3g030535 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| C2H3g24123 | 3:9,587,286-9,588,648 | + | C1H3g06291 | CX3g026844 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |