| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g03524 | 2:6,008,745-6,010,302 | - | - | CX2g024225 | - | Os02g0215950 | - | Detail |
| C1H2g31593 | 2:6,026,671-6,027,108 | - | - | CX2g020234 | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| C1H2g06960 | 2:6,125,275-6,125,894 | - | - | CX2g019918 | - | - | - | Detail |
| C1H2g11667 | 2:6,148,857-6,150,859 | + | C2H2g02696 | CX2g023027 | LOC_Os02g12540 | Os02g0217400 | - | Detail |
| C1H2g21017 | 2:6,152,410-6,154,218 | + | C2H2g14429 | CX2g021453 | LOC_Os02g12550 | Os02g0217400 | - | Detail |
| C1H2g21079 | 2:6,157,615-6,161,219 | - | C2H2g24815 | CX2g024364 | - | Os02g0781600 | - | Detail |
| C1H2g30831 | 2:6,161,626-6,162,084 | - | C2H2g26935 | CX2g023330 | LOC_Os02g12560 | Os02g0216300 | - | Detail |
| C1H2g13963 | 2:6,163,673-6,167,508 | + | C2H2g29582 | CX2g021931 | LOC_Os02g12570 | Os02g0217500 | - | Detail |
| C1H2g08914 | 2:6,168,127-6,172,409 | - | C2H2g00474 | CX2g021895 | LOC_Os02g12580 | Os02g0217600 | OsPP2A-3 | Detail |
| C1H2g12784 | 2:6,175,434-6,180,432 | + | C2H2g14099 | CX2g020586 | LOC_Os02g12600 | Os02g0217800 | - | Detail |
| C1H2g08167 | 2:6,180,757-6,181,281 | - | C2H2g20685 | CX2g021986 | LOC_Os02g12610 | Os02g0217900 | - | Detail |
| C1H2g05762 | 2:6,185,492-6,192,843 | + | C2H2g24551 | CX2g023749 | LOC_Os02g12650 | Os02g0218200 | - | Detail |
| C1H2g24654 | 2:6,196,948-6,200,952 | - | C2H2g28852 | CX2g022045 | LOC_Os02g12660 | Os02g0218400 | - | Detail |
| C1H2g26993 | 2:6,203,250-6,203,612 | - | C2H2g15247 | - | - | Os02g0218550 | - | Detail |
| C1H2g21561 | 2:6,203,356-6,210,518 | + | C2H2g19601 | CX2g024682 | LOC_Os02g12670 | Os02g0218600 | - | Detail |
| C1H2g18950 | 2:6,215,532-6,217,034 | + | - | CX2g024749 | LOC_Os02g12680 | Os02g0218700 | HPL2, AOS3, OsHPL2, OsAOS3 | Detail |
| C1H2g20313 | 2:6,227,518-6,229,050 | + | C2H2g08598 | CX2g024585 | LOC_Os02g12690 | Os02g0218800 | AOS4, HPL1, OsAOS4, CYP74A4, OsHPL1 | Detail |
| C1H2g05355 | 2:6,233,935-6,235,344 | - | C2H2g01092 | CX2g022637 | LOC_Os02g12700 | Os02g0219000 | - | Detail |
| C1H2g22168 | 2:6,237,636-6,238,940 | - | C2H2g01092 | CX2g023095 | LOC_Os02g12710 | Os02g0219050 | - | Detail |
| C1H2g29918 | 2:6,250,808-6,253,653 | + | C2H2g28886 | CX2g023642 | LOC_Os04g51490 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g16415 | 4:16,680,819-16,683,225 | + | C1H4g05012 | CX4g032937 | LOC_Os04g32660 | Os04g0398500 | - | Detail |
| C2H4g00377 | 4:16,685,637-16,688,441 | + | C1H4g28546 | CX4g033047 | LOC_Os04g32670 | Os04g0398600 | - | Detail |
| C2H4g14149 | 4:16,688,728-16,689,417 | - | C1H4g21316 | CX4g032973 | LOC_Os04g32680 | Os04g0398700 | - | Detail |
| C2H4g19288 | 4:16,691,600-16,705,738 | - | C1H4g20511 | CX4g032900 | LOC_Os04g32690 | Os04g0398800 | - | Detail |
| C2H4g10637 | 4:16,709,171-16,712,369 | + | C1H4g08073 | CX4g032898 | LOC_Os04g32710 | Os04g0399000 | - | Detail |
| C2H4g00186 | 4:16,719,550-16,722,777 | + | C1H4g26028 | CX4g035881 | LOC_Os04g32740 | Os04g0399300 | - | Detail |
| C2H4g03270 | 4:16,752,671-16,755,530 | - | C1H4g21348 | - | LOC_Os04g32800 | Os04g0400000 | - | Detail |
| C2H4g06368 | 4:16,756,251-16,756,596 | - | C1H4g06656 | - | - | Os04g0400000 | - | Detail |
| C2H4g21932 | 4:16,758,823-16,760,269 | - | C1H4g27942 | - | - | Os04g0572100 | - | Detail |
| C2H4g02618 | 4:16,776,503-16,777,991 | - | C1H4g05223 | - | LOC_Os04g32810 | Os04g0400000 | - | Detail |
| C2H4g22891 | 4:16,783,201-16,784,093 | - | C1H4g21891 | - | LOC_Os04g32820 | Os04g0400700 | - | Detail |
| C2H4g07833 | 4:16,785,737-16,786,556 | - | C1H4g02047 | - | LOC_Os04g32830 | Os04g0400700 | - | Detail |
| C2H4g00763 | 4:16,790,488-16,791,568 | - | C1H4g29317 | - | LOC_Os04g32840 | Os04g0400800 | - | Detail |
| C2H4g16334 | 4:16,801,987-16,804,816 | - | C1H4g17092 | - | LOC_Os04g32850 | Os04g0401000 | - | Detail |
| C2H4g26185 | 4:16,808,317-16,808,955 | - | C1H4g28791 | - | LOC_Os04g32860 | Os04g0401100 | - | Detail |
| C2H4g06643 | 4:16,818,523-16,826,437 | - | C1H4g19844 | CX4g036045 | LOC_Os04g32880 | Os04g0401300 | - | Detail |
| C2H4g15513 | 4:16,830,948-16,835,549 | - | - | CX4g033343 | - | - | - | Detail |
| C2H4g23329 | 4:16,849,362-16,854,724 | + | C1H4g01351 | CX4g035031 | LOC_Os04g32920 | Os04g0401700 | - | Detail |
| C2H4g07669 | 4:16,856,857-16,859,766 | - | C1H4g00308 | CX4g032032 | LOC_Os04g32930 | Os04g0401800 | OsSnm1 | Detail |
| C2H4g08341 | 4:16,862,071-16,867,821 | - | C1H4g06913 | CX4g033022 | LOC_Os04g32940 | Os04g0401900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |