| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g14164 | 2:5,782,637-5,783,032 | + | C2H2g26545 | - | LOC_Os02g12080 | Os02g0212400 | - | Detail |
| C1H2g27179 | 2:5,787,743-5,788,699 | + | C2H2g14725 | - | LOC_Os02g12090 | Os02g0212500 | - | Detail |
| C1H2g04594 | 2:5,794,065-5,831,620 | + | C2H2g03339 | CX2g022712 | LOC_Os02g12130 | Os02g0212900 | - | Detail |
| C1H2g05649 | 2:5,842,054-5,842,442 | - | C2H2g10808 | CX2g023767 | LOC_Os02g12180 | Os02g0213100 | - | Detail |
| C1H2g18056 | 2:5,846,573-5,846,764 | - | C2H2g22801 | CX2g023767 | LOC_Os02g12180 | Os02g0213100 | - | Detail |
| C1H2g22306 | 2:5,854,350-5,856,901 | + | C2H2g11617 | CX2g023550 | LOC_Os02g12200 | Os02g0213450 | - | Detail |
| C1H2g07423 | 2:5,902,417-5,904,923 | + | - | - | - | - | - | Detail |
| C1H2g08196 | 2:5,911,663-5,913,573 | + | C2H2g28886 | CX2g020359 | LOC_Os01g14200 | - | - | Detail |
| C1H2g14961 | 2:5,926,838-5,927,174 | - | C2H2g28181 | CX2g018944 | LOC_Os02g12270 | - | - | Detail |
| C1H2g08256 | 2:5,928,764-5,929,142 | - | C2H2g29814 | CX2g023092 | LOC_Os02g12280 | Os02g0213100 | - | Detail |
| C1H2g02744 | 2:5,944,472-5,946,376 | + | C2H2g19870 | CX2g019911 | LOC_Os02g12290 | Os02g0214300 | TMS5, OsaTRZ1 | Detail |
| C1H2g12990 | 2:5,946,870-5,949,146 | - | C2H2g11573 | CX2g020072 | LOC_Os02g12300 | Os02g0214400 | OsPLL3 | Detail |
| C1H2g03216 | 2:5,951,243-5,951,482 | + | C2H2g11062 | CX2g024612 | LOC_Os02g12310 | Os02g0214500 | OsNAC23 | Detail |
| C1H2g08668 | 2:5,952,145-5,952,723 | + | C2H2g11062 | CX2g024612 | LOC_Os02g12310 | Os02g0214500 | OsNAC23 | Detail |
| C1H2g14409 | 2:5,956,777-5,964,671 | - | C2H2g19304 | CX2g022032 | LOC_Os02g12380 | Os02g0214900 | - | Detail |
| C1H2g22759 | 2:5,967,712-5,977,088 | - | C2H2g23277 | CX2g021296 | LOC_Os02g12360 | Os02g0215000 | - | Detail |
| C1H2g12661 | 2:5,983,082-5,988,030 | + | C2H2g16235 | CX2g023655 | LOC_Os02g12350 | Os02g0214900 | - | Detail |
| C1H2g20950 | 2:5,993,194-5,997,165 | + | C2H2g03672 | CX2g019777 | LOC_Os02g12400 | Os02g0215500 | - | Detail |
| C1H2g30669 | 2:6,000,421-6,004,410 | + | C2H2g02434 | CX2g021303 | LOC_Os02g12440 | Os02g0215900 | OsGIRL1 | Detail |
| C1H2g31159 | 2:6,005,759-6,009,518 | + | C2H2g25097 | CX2g020152 | LOC_Os02g12450 | Os02g0216000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g26986 | 12:13,868,852-13,872,363 | - | C1H12g01168 | CX12g017787 | LOC_Os12g26940 | Os12g0454800 | CRL4, CHARK, S/T kinase, OsCRL4, OsHKL1, OsCDP | Detail |
| C2H12g26277 | 12:13,877,098-13,877,376 | + | C1H12g10028 | CX12g016039 | - | - | - | Detail |
| C2H12g14469 | 12:13,883,176-13,883,463 | + | - | CX12g015279 | - | - | - | Detail |
| C2H12g20253 | 12:13,923,564-13,926,914 | + | C1H12g23121 | CX12g017975 | LOC_Os12g27060 | Os12g0456100 | - | Detail |
| C2H12g20046 | 12:13,933,284-13,935,699 | - | C1H12g22119 | CX12g016746 | LOC_Os12g27070 | Os12g0456200 | - | Detail |
| C2H12g00613 | 12:13,941,227-13,942,524 | + | C1H12g04965 | CX12g016453 | LOC_Os12g27090 | - | - | Detail |
| C2H12g27509 | 12:13,944,888-13,949,711 | + | C1H12g13521 | CX12g016453 | LOC_Os12g27090 | Os12g0456400 | - | Detail |
| C2H12g10115 | 12:13,959,959-13,960,153 | + | C1H12g25831 | CX12g016959 | LOC_Os12g27190 | Os12g0457200 | - | Detail |
| C2H12g15729 | 12:13,965,338-13,966,053 | - | C1H12g02272 | CX12g018094 | LOC_Os12g27220 | Os12g0458100 | - | Detail |
| C2H12g06376 | 12:13,985,180-13,990,362 | - | C1H12g18821 | CX12g018094 | LOC_Os12g27254 | Os12g0458100 | - | Detail |
| C2H12g20196 | 12:14,039,231-14,041,613 | - | C1H12g15735 | CX12g016893 | LOC_Os12g27350 | Os12g0459100 | - | Detail |
| C2H12g17708 | 12:14,082,641-14,091,586 | + | C1H12g04555 | CX12g017463 | LOC_Os12g26870 | Os12g0539700 | - | Detail |
| C2H12g01706 | 12:14,125,247-14,125,945 | + | C1H12g05201 | CX12g017942 | LOC_Os12g27440 | Os12g0460100 | - | Detail |
| C2H12g06459 | 12:14,164,936-14,165,628 | + | C1H12g24783 | CX12g018706 | LOC_Os12g27470 | Os12g0460400 | - | Detail |
| C2H12g17065 | 12:14,187,297-14,190,636 | - | C1H12g15830 | CX12g016743 | LOC_Os12g27520 | Os12g0460800 | - | Detail |
| C2H12g17820 | 12:14,218,232-14,220,063 | - | - | - | - | - | - | Detail |
| C2H12g15845 | 12:14,293,814-14,294,248 | + | C1H12g21553 | CX12g015222 | - | Os12g0461050 | - | Detail |
| C2H12g06780 | 12:14,337,541-14,338,884 | + | - | CX12g015743 | LOC_Os12g27690 | Os12g0462700 | - | Detail |
| C2H12g13285 | 12:14,354,156-14,355,628 | + | C1H12g17942 | CX12g015075 | LOC_Os12g27760 | Os12g0464300 | - | Detail |
| C2H12g13517 | 12:14,380,631-14,382,019 | + | C1H12g24196 | CX12g015075 | LOC_Os12g27810 | Os12g0464300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |