| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24775 | 1:8,645,029-8,649,014 | - | C2H1g11604 | CX1g003930 | LOC_Os01g16940 | Os01g0276500 | - | Detail |
| C1H1g24762 | 1:8,653,753-8,659,331 | - | C2H1g19690 | CX1g001281 | LOC_Os01g16960 | Os01g0276700 | - | Detail |
| C1H1g09923 | 1:8,661,779-8,668,765 | - | C2H1g18824 | CX1g002381 | LOC_Os01g16970 | Os01g0276800 | - | Detail |
| C1H1g21978 | 1:8,700,445-8,704,557 | + | C2H1g19986 | CX1g006477 | LOC_Os01g17000 | Os01g0277500 | OsDof4 | Detail |
| C1H1g27208 | 1:8,704,758-8,711,317 | - | C2H1g07072 | CX1g007267 | LOC_Os01g17010 | Os01g0277600 | - | Detail |
| C1H1g17418 | 1:8,716,992-8,720,590 | + | C2H1g19392 | CX1g005265 | LOC_Os01g17020 | Os01g0277700 | - | Detail |
| C1H1g04503 | 1:8,731,265-8,733,966 | + | C2H1g04598 | CX1g005153 | LOC_Os01g17040 | Os01g0277900 | - | Detail |
| C1H1g05776 | 1:8,740,852-8,741,625 | + | - | - | - | - | - | Detail |
| C1H1g02166 | 1:8,764,258-8,764,802 | + | - | - | LOC_Os01g11390 | - | - | Detail |
| C1H1g30954 | 1:8,780,320-8,783,812 | - | C2H1g07110 | CX1g000790 | - | Os01g0587900 | - | Detail |
| C1H1g02087 | 1:8,829,223-8,834,365 | + | C2H1g16144 | CX1g004265 | LOC_Os01g17070 | Os01g0278600 | - | Detail |
| C1H1g02797 | 1:8,837,973-8,846,001 | + | C2H1g08246 | CX1g006647 | LOC_Os01g17130 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C1H1g13085 | 1:8,848,562-8,849,708 | + | C2H1g26662 | CX1g006879 | LOC_Os01g17150 | Os01g0278900 | - | Detail |
| C1H1g02366 | 1:8,852,382-8,855,936 | + | C2H1g17354 | CX1g003704 | - | Os01g0278950 | - | Detail |
| C1H1g14516 | 1:8,858,320-8,860,953 | + | C2H1g17913 | CX1g003816 | LOC_Os01g17160 | Os01g0279000 | - | Detail |
| C1H1g07749 | 1:8,864,212-8,866,408 | + | C2H1g17524 | CX1g000834 | LOC_Os01g17170 | Os01g0279100 | - | Detail |
| C1H1g16851 | 1:8,868,387-8,875,677 | + | C2H1g17466 | CX1g007235 | LOC_Os01g17180 | Os01g0279200 | - | Detail |
| C1H1g05535 | 1:8,878,112-8,879,335 | + | C2H1g16329 | CX1g007190 | LOC_Os01g17190 | Os01g0267900 | OsCam1-3, OsCaM1 | Detail |
| C1H1g02160 | 1:8,880,427-8,884,749 | - | C2H1g14085 | CX1g006985 | LOC_Os01g17214 | Os01g0279400 | - | Detail |
| C1H1g07464 | 1:8,891,101-8,891,520 | - | C2H1g12172 | CX1g006985 | LOC_Os01g17214 | Os01g0279400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25284 | 4:26,053,158-26,054,280 | - | C1H4g15893 | CX4g035889 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| C2H4g12319 | 4:26,054,891-26,057,188 | - | C1H4g02523 | CX4g035681 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| C2H4g13155 | 4:26,057,959-26,060,860 | - | C1H4g06092 | CX4g036218 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| C2H4g11382 | 4:26,062,604-26,064,996 | - | C1H4g28733 | CX4g036257 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| C2H4g16073 | 4:26,065,855-26,071,021 | - | C1H4g04973 | CX4g033183 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| C2H4g00138 | 4:26,079,042-26,083,754 | - | C1H4g07853 | CX4g032625 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| C2H4g09942 | 4:26,085,183-26,089,337 | - | C1H4g08504 | CX4g033956 | LOC_Os04g51190 | Os04g0574500 | - | Detail |
| C2H4g25560 | 4:26,102,155-26,103,523 | - | C1H4g18677 | CX4g032272 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| C2H4g10254 | 4:26,104,987-26,107,216 | - | C1H4g11359 | CX4g033025 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| C2H4g14874 | 4:26,106,519-26,110,669 | + | C1H4g26178 | CX4g034624 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| C2H4g01351 | 4:26,111,323-26,112,177 | - | C1H4g02715 | CX4g036413 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| C2H4g08450 | 4:26,113,702-26,115,692 | + | C1H4g04277 | - | LOC_Os04g51280 | Os04g0601800 | WSP1 | Detail |
| C2H4g18195 | 4:26,116,346-26,119,282 | + | C1H4g31358 | CX4g031538 | LOC_Os04g51300 | Os04g0602100 | - | Detail |
| C2H4g21768 | 4:26,119,417-26,121,708 | - | C1H4g26391 | CX4g033882 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| C2H4g22043 | 4:26,123,267-26,125,534 | - | C1H4g19881 | CX4g033318 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| C2H4g12426 | 4:26,127,370-26,131,567 | - | C1H4g05144 | CX4g034293 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| C2H4g05437 | 4:26,134,548-26,138,254 | + | C1H4g22875 | CX4g033998 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| C2H4g15861 | 4:26,139,791-26,142,202 | + | C1H4g12838 | CX4g032956 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| C2H4g20183 | 4:26,143,347-26,145,256 | - | C1H4g06807 | CX4g034077 | LOC_Os04g51360 | Os04g0602700 | - | Detail |
| C2H4g18022 | 4:26,146,411-26,154,053 | - | C1H4g07013 | CX4g035673 | LOC_Os04g51370 | Os04g0602800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |