| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29802 | 2:5,383,622-5,385,125 | + | C2H2g15057 | CX2g024407 | LOC_Os02g11000 | Os02g0204500 | - | Detail |
| C1H2g04626 | 2:5,415,858-5,418,128 | - | C2H2g26988 | CX2g022229 | LOC_Os02g11020 | Os02g0204700 | - | Detail |
| C1H2g15482 | 2:5,458,940-5,460,753 | - | C2H2g03770 | CX2g019164 | LOC_Os02g11030 | Os02g0524300 | - | Detail |
| C1H2g23876 | 2:5,463,999-5,465,295 | - | C2H2g05927 | CX2g022500 | LOC_Os02g11040 | Os02g0205200 | - | Detail |
| C1H2g25099 | 2:5,473,185-5,477,760 | - | C2H2g06065 | CX2g023949 | LOC_Os02g11050 | Os02g0205300 | - | Detail |
| C1H2g05033 | 2:5,480,227-5,484,282 | + | C2H2g04587 | CX2g022352 | LOC_Os02g11060 | Os02g0205400 | - | Detail |
| C1H2g29417 | 2:5,484,822-5,485,841 | + | C2H2g04587 | CX2g022352 | LOC_Os02g11060 | Os02g0205400 | - | Detail |
| C1H2g08007 | 2:5,486,586-5,488,267 | - | C2H2g22003 | CX2g023216 | LOC_Os02g11070 | Os02g0205500 | - | Detail |
| C1H2g24287 | 2:5,523,203-5,524,024 | - | C2H2g24159 | CX2g022369 | LOC_Os02g11130 | Os02g0206100 | - | Detail |
| C1H2g21297 | 2:5,524,559-5,525,479 | - | C2H2g24159 | CX2g022369 | LOC_Os02g11130 | Os02g0206400 | - | Detail |
| C1H2g29889 | 2:5,534,613-5,536,118 | - | C2H2g29066 | CX2g022369 | LOC_Os02g11640 | Os02g0206700 | - | Detail |
| C1H2g01545 | 2:5,547,054-5,548,580 | - | C2H2g30192 | CX2g019290 | LOC_Os02g11700 | Os02g0207400 | - | Detail |
| C1H2g14566 | 2:5,560,262-5,561,293 | - | - | CX2g021911 | LOC_Os02g11720 | Os02g0207900 | - | Detail |
| C1H2g29358 | 2:5,568,744-5,571,951 | + | C2H2g03981 | CX2g020606 | LOC_Os02g11740 | Os02g0208100 | - | Detail |
| C1H2g23035 | 2:5,574,251-5,578,750 | + | C2H2g24455 | CX2g021946 | LOC_Os02g11750 | Os02g0208200 | - | Detail |
| C1H2g17893 | 2:5,581,150-5,587,784 | + | C2H2g09865 | CX2g021771 | LOC_Os02g11760 | Os02g0208300 | - | Detail |
| C1H2g22545 | 2:5,590,548-5,591,058 | - | C2H2g01884 | CX2g021027 | LOC_Os02g11770 | Os02g0208500 | - | Detail |
| C1H2g16956 | 2:5,595,193-5,601,769 | + | C2H2g07986 | CX2g021175 | LOC_Os02g11780 | Os02g0208600 | - | Detail |
| C1H2g08246 | 2:5,602,930-5,603,687 | + | - | CX2g020996 | - | Os02g0208650 | - | Detail |
| C1H2g30795 | 2:5,607,442-5,608,590 | - | C2H2g00364 | CX2g019896 | LOC_Os02g11790 | Os02g0208700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28905 | 5:9,107,917-9,109,364 | - | C1H5g26341 | CX5g040110 | LOC_Os05g19570 | Os05g0276500 | OsEXPA3 | Detail |
| C2H5g07930 | 5:9,137,558-9,138,574 | - | C1H5g09212 | CX5g038660 | LOC_Os05g19600 | Os05g0277000 | - | Detail |
| C2H5g03374 | 5:9,157,292-9,159,827 | - | C1H5g06044 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C2H5g20956 | 5:9,186,603-9,187,349 | + | C1H5g02530 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C2H5g25018 | 5:9,249,128-9,255,855 | - | C1H5g11498 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C2H5g00557 | 5:9,270,807-9,271,806 | - | - | CX5g039844 | - | - | - | Detail |
| C2H5g28009 | 5:9,282,859-9,290,634 | - | C1H5g29704 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C2H5g12080 | 5:9,309,446-9,315,430 | + | C1H5g23736 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C2H5g08718 | 5:9,320,458-9,330,009 | + | C1H5g23078 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C2H5g23273 | 5:9,337,131-9,340,143 | + | C1H5g13096 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C2H5g01527 | 5:9,411,485-9,413,024 | + | C1H5g25005 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C2H5g23868 | 5:9,415,022-9,418,946 | - | C1H5g28156 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C2H5g28478 | 5:9,448,522-9,451,356 | - | C1H5g26284 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C2H5g04863 | 5:9,476,010-9,478,803 | - | - | CX5g039194 | - | - | - | Detail |
| C2H5g21904 | 5:9,484,936-9,486,894 | + | - | - | - | - | - | Detail |
| C2H5g02247 | 5:9,509,517-9,509,885 | - | C1H5g03157 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C2H5g18533 | 5:9,522,507-9,524,670 | - | C1H5g05125 | - | - | - | - | Detail |
| C2H5g23953 | 5:9,530,132-9,530,514 | - | C1H5g08577 | - | - | Os02g0216200 | - | Detail |
| C2H5g14404 | 5:10,011,667-10,016,243 | - | C1H5g05724 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C2H5g08960 | 5:10,306,871-10,307,263 | + | C1H5g04296 | CX5g039313 | - | Os05g0289100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |