| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g23514 | 2:5,188,240-5,188,770 | - | C2H2g02539 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C1H2g23712 | 2:5,204,367-5,207,578 | - | C2H2g22913 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C1H2g24067 | 2:5,222,676-5,226,523 | + | C2H2g21450 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C1H2g20496 | 2:5,228,279-5,231,380 | - | C2H2g30620 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C1H2g04540 | 2:5,238,875-5,242,671 | + | C2H2g13782 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C1H2g00291 | 2:5,242,962-5,272,034 | - | C2H2g29179 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| C1H2g24396 | 2:5,276,796-5,278,565 | + | C2H2g11742 | CX2g021980 | LOC_Os02g10800 | Os02g0202400 | BT1-1, OsBT1-1, OsEnS-29 | Detail |
| C1H2g08933 | 2:5,279,378-5,281,076 | - | C2H2g19152 | CX2g024114 | LOC_Os02g10810 | Os02g0202500 | - | Detail |
| C1H2g31316 | 2:5,288,596-5,290,118 | - | - | CX2g019700 | - | - | - | Detail |
| C1H2g01124 | 2:5,293,016-5,295,891 | - | C2H2g03245 | CX2g021583 | LOC_Os02g10820 | Os02g0202600 | - | Detail |
| C1H2g31302 | 2:5,296,757-5,301,890 | - | C2H2g06319 | CX2g022814 | LOC_Os02g10830 | Os02g0202700 | OsSAT1;2 | Detail |
| C1H2g29373 | 2:5,303,345-5,306,479 | - | C2H2g07043 | CX2g019052 | LOC_Os02g10850 | Os02g0202900 | - | Detail |
| C1H2g02349 | 2:5,306,902-5,310,715 | - | C2H2g24991 | CX2g019052 | LOC_Os02g10860 | Os02g0203000 | OsHY5L1, OsbZIP18 | Detail |
| C1H2g01017 | 2:5,335,155-5,336,615 | + | C2H2g26118 | CX2g020727 | LOC_Os02g10880 | Os02g0203300 | - | Detail |
| C1H2g00292 | 2:5,338,551-5,339,404 | - | - | - | - | - | - | Detail |
| C1H2g24176 | 2:5,344,159-5,348,521 | - | C2H2g10759 | CX2g020524 | LOC_Os02g10900 | Os02g0203500 | RLS1 | Detail |
| C1H2g09288 | 2:5,351,796-5,353,023 | - | C2H2g18458 | CX2g021071 | LOC_Os02g10920 | Os02g0203700 | SRZ1 | Detail |
| C1H2g31487 | 2:5,365,542-5,366,270 | - | - | CX2g019443 | LOC_Os02g10940 | Os02g0204000 | - | Detail |
| C1H2g01355 | 2:5,367,074-5,375,206 | + | C2H2g20592 | CX2g021033 | LOC_Os02g10970 | Os02g0204300 | - | Detail |
| C1H2g02729 | 2:5,376,552-5,379,706 | + | C2H2g16217 | CX2g020882 | LOC_Os02g10990 | Os02g0204400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09327 | 9:13,875,100-13,879,319 | + | C1H9g31300 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C2H9g09643 | 9:13,880,339-13,881,312 | + | C1H9g01379 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C2H9g29764 | 9:13,882,563-13,883,261 | + | C1H9g01379 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C2H9g16614 | 9:13,887,628-13,888,458 | + | C1H9g03322 | - | - | - | - | Detail |
| C2H9g09141 | 9:13,889,098-13,895,761 | - | C1H9g17916 | CX9g055460 | LOC_Os09g27210 | Os09g0444200 | - | Detail |
| C2H9g02894 | 9:13,900,760-13,906,113 | + | C1H9g09508 | CX9g057848 | LOC_Os09g27230 | Os09g0444500 | OsBRXL5 | Detail |
| C2H9g30118 | 9:13,908,696-13,912,600 | - | C1H9g07241 | CX9g055599 | LOC_Os09g27240 | Os09g0444700 | - | Detail |
| C2H9g28364 | 9:13,953,539-13,953,917 | - | C1H9g21040 | CX9g055484 | - | Os09g0446000 | - | Detail |
| C2H9g18491 | 9:13,961,614-13,964,547 | + | C1H9g31748 | CX9g057107 | LOC_Os09g27370 | Os09g0446200 | - | Detail |
| C2H9g27667 | 9:13,970,956-13,971,406 | - | C1H9g05710 | - | LOC_Os09g27400 | Os09g0446350 | - | Detail |
| C2H9g19872 | 9:13,975,397-13,979,614 | + | C1H9g06655 | CX9g055024 | LOC_Os09g27420 | Os09g0446800 | - | Detail |
| C2H9g27951 | 9:13,990,724-13,992,110 | - | C1H9g12096 | CX9g056835 | LOC_Os09g27450 | Os09g0447000 | - | Detail |
| C2H9g24846 | 9:14,009,868-14,012,588 | + | C1H9g25366 | CX9g055614 | LOC_Os09g27490 | - | - | Detail |
| C2H9g03009 | 9:14,017,302-14,019,718 | - | C1H9g31093 | CX9g057770 | LOC_Os09g27500 | Os09g0447300 | - | Detail |
| C2H9g15068 | 9:14,024,086-14,026,037 | - | C1H9g08652 | CX9g054878 | LOC_Os09g27510 | Os09g0447500 | - | Detail |
| C2H9g11232 | 9:14,030,857-14,033,106 | - | C1H9g00733 | CX9g057290 | LOC_Os09g27520 | Os09g0447600 | - | Detail |
| C2H9g00780 | 9:14,036,647-14,037,618 | - | C1H9g18103 | CX9g055092 | LOC_Os09g27570 | Os09g0448100 | - | Detail |
| C2H9g18939 | 9:14,042,420-14,047,560 | + | C1H9g10551 | CX9g055809 | LOC_Os09g27580 | Os09g0448200 | - | Detail |
| C2H9g17309 | 9:14,054,454-14,056,544 | + | C1H9g31490 | CX9g055972 | LOC_Os09g27590 | Os09g0448500 | GS9 | Detail |
| C2H9g13055 | 9:14,068,662-14,072,538 | + | C1H9g23054 | CX9g056032 | LOC_Os09g27610 | Os09g0448900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |