| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g31527 | 2:4,921,847-4,924,219 | + | C2H2g08200 | CX2g019347 | LOC_Os02g10300 | Os02g0196700 | - | Detail |
| C1H2g04707 | 2:4,925,493-4,929,282 | - | C2H2g29621 | CX2g023163 | LOC_Os02g10310 | Os02g0196800 | - | Detail |
| C1H2g20778 | 2:4,932,826-4,936,659 | - | C2H2g18849 | CX2g019769 | LOC_Os02g10320 | Os02g0196900 | - | Detail |
| C1H2g28814 | 2:4,939,865-4,944,659 | + | C2H2g03835 | CX2g021812 | LOC_Os02g10350 | Os02g0197200 | - | Detail |
| C1H2g09563 | 2:4,949,391-4,950,671 | - | C2H2g07243 | CX2g020575 | LOC_Os02g10360 | Os02g0197300 | - | Detail |
| C1H2g29849 | 2:4,962,625-4,962,915 | - | C2H2g28704 | CX2g019476 | LOC_Os02g10370 | Os02g0197400 | - | Detail |
| C1H2g26101 | 2:4,963,636-4,966,802 | - | C2H2g03738 | CX2g021613 | LOC_Os02g10380 | Os02g0197500 | - | Detail |
| C1H2g09204 | 2:4,967,310-4,969,846 | - | C2H2g30082 | CX2g024239 | LOC_Os02g10390 | Os02g0197600 | - | Detail |
| C1H2g08703 | 2:4,971,078-4,972,928 | - | C2H2g23572 | CX2g024372 | LOC_Os02g10400 | Os02g0197700 | - | Detail |
| C1H2g03287 | 2:4,976,974-4,977,282 | - | C2H2g10563 | CX2g019447 | LOC_Os02g10420 | Os02g0197750 | - | Detail |
| C1H2g03461 | 2:4,977,314-4,977,529 | - | C2H2g10563 | CX2g019447 | - | - | - | Detail |
| C1H2g10538 | 2:4,977,531-4,977,884 | - | C2H2g10563 | CX2g019447 | - | - | - | Detail |
| C1H2g22400 | 2:4,980,022-4,981,763 | - | C2H2g12374 | CX2g021268 | LOC_Os02g10430 | Os02g0197800 | - | Detail |
| C1H2g26517 | 2:4,983,984-4,990,918 | + | C2H2g15896 | CX2g021244 | LOC_Os02g10440 | Os02g0197900 | - | Detail |
| C1H2g08367 | 2:4,992,370-4,993,575 | - | C2H2g26412 | CX2g022220 | LOC_Os02g10450 | Os02g0198000 | - | Detail |
| C1H2g01859 | 2:5,009,807-5,011,923 | + | C2H2g19596 | CX2g023181 | LOC_Os02g10470 | Os02g0198200 | - | Detail |
| C1H2g30719 | 2:5,013,190-5,016,586 | + | C2H2g27317 | CX2g019285 | LOC_Os02g10480 | Os02g0198300 | OsAGAP | Detail |
| C1H2g04233 | 2:5,019,941-5,021,140 | + | - | - | - | - | - | Detail |
| C1H2g13603 | 2:5,028,078-5,032,344 | - | C2H2g13295 | CX2g023642 | - | - | - | Detail |
| C1H2g15581 | 2:5,036,524-5,040,260 | - | C2H2g28886 | CX2g019803 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g03370 | 2:20,500,130-20,501,561 | + | C1H2g26519 | CX2g024727 | LOC_Os02g36285 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C2H2g08598 | 2:20,526,537-20,529,407 | + | C1H2g27996 | CX2g019614 | LOC_Os02g36150 | Os02g0570500 | - | Detail |
| C2H2g05039 | 2:20,533,465-20,536,049 | - | C1H2g01402 | CX2g023226 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| C2H2g24869 | 2:20,576,137-20,577,813 | - | - | - | LOC_Os09g27734 | - | - | Detail |
| C2H2g17098 | 2:20,587,097-20,591,340 | + | C1H2g07162 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C2H2g28683 | 2:20,591,947-20,593,508 | + | C1H2g07162 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C2H2g13289 | 2:20,599,954-20,602,598 | - | C1H2g03952 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C2H2g08650 | 2:20,605,548-20,607,139 | - | C1H2g03952 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C2H2g08973 | 2:20,608,206-20,609,564 | - | - | - | - | - | - | Detail |
| C2H2g07065 | 2:20,621,490-20,623,110 | - | C1H2g22902 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C2H2g09109 | 2:20,626,203-20,629,889 | - | C1H2g02826 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C2H2g15028 | 2:20,635,878-20,639,875 | - | C1H2g09017 | CX2g024086 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| C2H2g16141 | 2:20,648,025-20,648,882 | + | C1H2g18768 | CX2g024727 | LOC_Os02g36285 | Os02g0572050 | - | Detail |
| C2H2g09753 | 2:20,655,604-20,656,650 | - | C1H2g17745 | CX2g018873 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| C2H2g01273 | 2:20,658,486-20,658,890 | - | C1H2g12070 | - | - | Os02g0572300 | - | Detail |
| C2H2g16620 | 2:20,663,417-20,670,683 | - | C1H2g26185 | CX2g023356 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| C2H2g00545 | 2:20,686,435-20,687,808 | - | C1H2g25932 | CX2g023112 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| C2H2g01996 | 2:20,697,379-20,700,730 | - | C1H2g10452 | CX2g023654 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| C2H2g05333 | 2:20,718,744-20,722,543 | + | C1H2g13546 | CX2g018889 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |
| C2H2g01642 | 2:20,723,188-20,728,600 | - | C1H2g14408 | CX2g019460 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |