| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12750 | 2:4,583,929-4,587,370 | - | C2H2g25953 | CX2g024871 | LOC_Os02g09840 | Os02g0191700 | - | Detail |
| C1H2g24745 | 2:4,591,010-4,591,429 | - | - | CX2g022394 | LOC_Os02g09850 | Os02g0191800 | - | Detail |
| C1H2g16180 | 2:4,625,822-4,626,106 | - | - | CX2g019054 | - | Os02g0192001 | - | Detail |
| C1H2g24300 | 2:4,635,045-4,636,322 | + | - | - | - | Os02g0192150 | - | Detail |
| C1H2g08390 | 2:4,635,477-4,638,644 | - | C2H2g20717 | CX2g018975 | LOC_Os02g09890 | Os02g0192100 | - | Detail |
| C1H2g01762 | 2:4,638,494-4,643,845 | + | C2H2g09261 | - | - | - | - | Detail |
| C1H2g02906 | 2:4,653,575-4,665,547 | + | C2H2g06391 | CX2g023082 | LOC_Os02g09920 | Os02g0192400 | - | Detail |
| C1H2g04685 | 2:4,666,243-4,673,291 | - | C2H2g09534 | CX2g023359 | LOC_Os02g09930 | Os02g0192500 | - | Detail |
| C1H2g14535 | 2:4,672,860-4,673,974 | + | - | - | - | Os02g0192600 | - | Detail |
| C1H2g25894 | 2:4,681,572-4,682,249 | - | - | CX2g019586 | LOC_Os02g09940 | Os02g0192700 | - | Detail |
| C1H2g04517 | 2:4,685,344-4,687,407 | + | C2H2g26045 | CX2g020801 | LOC_Os02g09960 | Os02g0681700 | - | Detail |
| C1H2g25431 | 2:4,689,948-4,690,580 | - | - | CX2g022277 | LOC_Os02g09970 | Os02g0193100 | - | Detail |
| C1H2g12943 | 2:4,694,667-4,695,293 | - | - | CX2g020426 | LOC_Os02g09990 | Os02g0193300 | - | Detail |
| C1H2g12889 | 2:4,709,681-4,710,259 | - | - | CX2g021141 | LOC_Os02g09990 | Os02g0193300 | - | Detail |
| C1H2g13857 | 2:4,717,773-4,720,024 | - | C2H2g08116 | CX2g024515 | LOC_Os02g10000 | Os02g0692700 | - | Detail |
| C1H2g15220 | 2:4,723,296-4,723,736 | + | - | CX2g020013 | LOC_Os02g10010 | Os02g0193500 | - | Detail |
| C1H2g07967 | 2:4,724,489-4,727,420 | + | C2H2g15037 | CX2g019793 | LOC_Os02g10020 | Os02g0193600 | - | Detail |
| C1H2g01917 | 2:4,749,154-4,749,519 | + | - | CX2g023961 | LOC_Os02g10030 | Os02g0193732 | - | Detail |
| C1H2g07472 | 2:4,751,134-4,759,503 | - | C2H2g08713 | CX2g019209 | LOC_Os02g10040 | Os02g0193800 | - | Detail |
| C1H2g02212 | 2:4,759,965-4,762,033 | + | C2H2g17619 | CX2g024742 | LOC_Os02g10050 | Os02g0193900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g05876 | 9:16,546,373-16,554,002 | + | C1H9g02458 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C2H9g29007 | 9:16,556,529-16,560,311 | + | C1H9g22232 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C2H9g16087 | 9:16,569,730-16,574,485 | + | C1H9g22572 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C2H9g24094 | 9:16,581,754-16,587,842 | + | C1H9g01976 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C2H9g09810 | 9:16,589,996-16,592,464 | + | C1H9g31066 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C2H9g27580 | 9:16,599,465-16,601,679 | + | C1H9g29777 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C2H9g28610 | 9:16,602,742-16,605,103 | - | C1H9g05594 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C2H9g13596 | 9:16,606,738-16,608,087 | - | C1H9g16500 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C2H9g15981 | 9:16,609,762-16,611,896 | - | C1H9g04875 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C2H9g02236 | 9:16,618,886-16,620,798 | - | C1H9g11387 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C2H9g17381 | 9:16,621,727-16,623,599 | - | C1H9g14135 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C2H9g06782 | 9:16,627,182-16,630,912 | - | C1H9g15525 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C2H9g02430 | 9:16,630,958-16,632,727 | - | C1H9g13578 | - | - | - | - | Detail |
| C2H9g07870 | 9:16,635,801-16,636,391 | + | C1H9g29300 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C2H9g16760 | 9:16,636,412-16,637,056 | + | C1H9g29300 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C2H9g21730 | 9:16,649,061-16,660,781 | - | C1H9g22826 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C2H9g10967 | 9:16,673,243-16,674,601 | + | C1H9g05421 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| C2H9g06327 | 9:16,676,674-16,683,065 | + | C1H9g29478 | CX9g057601 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| C2H9g10101 | 9:16,684,349-16,691,879 | + | C1H9g15901 | CX9g058204 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| C2H9g04957 | 9:16,695,642-16,700,718 | + | C1H9g15862 | CX9g055855 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |