| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g06764 | 2:4,415,986-4,419,645 | + | C2H2g11577 | CX2g024862 | LOC_Os02g09620 | Os02g0189300 | - | Detail |
| C1H2g26037 | 2:4,420,482-4,421,505 | - | C2H2g10166 | CX2g024704 | LOC_Os02g09630 | Os02g0189400 | - | Detail |
| C1H2g12021 | 2:4,430,237-4,430,836 | - | C2H2g02446 | CX2g020740 | LOC_Os02g09650 | Os02g0797100 | - | Detail |
| C1H2g06273 | 2:4,437,020-4,444,070 | + | C2H2g24841 | - | - | - | - | Detail |
| C1H2g06467 | 2:4,438,145-4,440,467 | - | C2H2g02506 | CX2g022600 | LOC_Os02g09720 | Os02g0189800 | - | Detail |
| C1H2g01542 | 2:4,447,905-4,451,405 | - | C2H2g14951 | - | - | - | - | Detail |
| C1H2g30083 | 2:4,467,183-4,476,616 | + | C2H2g24841 | - | - | Os02g0189900 | - | Detail |
| C1H2g16474 | 2:4,469,625-4,474,498 | - | C2H2g18329 | CX2g021632 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C1H2g07631 | 2:4,477,997-4,479,524 | + | C2H2g22278 | CX2g021632 | LOC_Os02g09710 | Os02g0190100 | - | Detail |
| C1H2g04187 | 2:4,484,254-4,493,683 | - | C2H2g18329 | CX2g021192 | LOC_Os02g09720 | Os02g0190300 | - | Detail |
| C1H2g21943 | 2:4,517,415-4,523,389 | + | C2H2g06769 | CX2g022054 | LOC_Os02g09740 | Os02g0190500 | - | Detail |
| C1H2g24836 | 2:4,524,050-4,525,519 | - | - | CX2g022421 | LOC_Os02g09750 | Os02g0190600 | OsLCYbeta, OsLCYβ | Detail |
| C1H2g15779 | 2:4,528,690-4,529,268 | - | C2H2g16178 | CX2g023142 | LOC_Os02g09760 | Os02g0190700 | - | Detail |
| C1H2g04808 | 2:4,534,144-4,538,120 | - | C2H2g05420 | CX2g021348 | LOC_Os02g09770 | Os02g0190800 | - | Detail |
| C1H2g13385 | 2:4,540,537-4,541,961 | - | C2H2g18343 | CX2g020459 | LOC_Os02g09780 | Os02g0190900 | - | Detail |
| C1H2g24338 | 2:4,558,602-4,561,334 | - | C2H2g20012 | CX2g022282 | LOC_Os02g09790 | Os02g0191000 | NBS-Str1 | Detail |
| C1H2g19462 | 2:4,564,768-4,566,899 | + | C2H2g13140 | CX2g024733 | LOC_Os02g09800 | Os02g0191200 | - | Detail |
| C1H2g16598 | 2:4,569,100-4,573,528 | - | C2H2g19527 | CX2g019369 | LOC_Os02g09810 | Os02g0191300 | OsATL6 | Detail |
| C1H2g02472 | 2:4,576,028-4,578,203 | + | C2H2g07551 | CX2g021648 | LOC_Os02g09820 | Os02g0191500 | - | Detail |
| C1H2g05141 | 2:4,579,357-4,579,866 | - | C2H2g25351 | CX2g022552 | LOC_Os02g09830 | Os02g0191600 | OsbZIP16 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g15259 | 9:13,434,841-13,435,822 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g03422 | 9:13,437,865-13,441,018 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g09724 | 9:13,446,277-13,447,467 | + | C1H9g05369 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C2H9g14632 | 9:13,456,830-13,458,152 | + | C1H9g19041 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C2H9g30633 | 9:13,459,794-13,462,499 | - | C1H9g08312 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C2H9g21233 | 9:13,465,283-13,476,610 | + | C1H9g26425 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C2H9g00492 | 9:13,477,413-13,480,745 | + | C1H9g23177 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C2H9g23573 | 9:13,522,063-13,523,941 | + | C1H9g21686 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C2H9g14978 | 9:13,536,716-13,541,741 | + | C1H9g24554 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| C2H9g27047 | 9:13,553,018-13,564,034 | + | C1H9g08513 | CX9g054927 | LOC_Os09g26660 | Os09g0438000 | - | Detail |
| C2H9g20994 | 9:13,576,305-13,580,039 | + | C1H9g20112 | CX9g057379 | LOC_Os09g26700 | Os09g0438400 | - | Detail |
| C2H9g14306 | 9:13,584,816-13,588,809 | - | C1H9g28577 | CX9g055603 | LOC_Os09g26730 | Os09g0438700 | - | Detail |
| C2H9g11312 | 9:13,589,802-13,595,397 | - | C1H9g16805 | CX9g056328 | LOC_Os09g26760 | Os09g0439000 | - | Detail |
| C2H9g23826 | 9:13,601,591-13,602,833 | - | C1H9g29651 | CX9g056370 | LOC_Os09g26780 | Os09g0439200 | TIFY10C, OsJAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8 | Detail |
| C2H9g11140 | 9:13,611,056-13,615,575 | + | C1H9g23984 | CX9g055995 | LOC_Os09g26800 | Os09g0439400 | - | Detail |
| C2H9g08335 | 9:13,616,371-13,619,064 | + | C1H9g04697 | CX9g055543 | LOC_Os09g26810 | Os09g0439500 | - | Detail |
| C2H9g01871 | 9:13,629,522-13,633,996 | - | C1H9g08389 | CX9g057070 | LOC_Os09g26830 | Os09g0439700 | - | Detail |
| C2H9g05545 | 9:13,636,587-13,639,099 | - | C1H9g03005 | CX9g056810 | LOC_Os09g26840 | Os09g0439800 | DRO1, Dro1 | Detail |
| C2H9g26904 | 9:13,651,920-13,656,034 | + | C1H9g31362 | CX9g057829 | LOC_Os09g26870 | Os09g0440200 | - | Detail |
| C2H9g23477 | 9:13,656,062-13,663,114 | - | C1H9g12516 | CX9g057254 | LOC_Os09g26880 | Os09g0440300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |