| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g27048 | 2:4,293,122-4,294,772 | + | C2H2g12239 | - | LOC_Os02g09410 | Os02g0187000 | - | Detail |
| C1H2g08553 | 2:4,295,421-4,296,026 | + | C2H2g19021 | CX2g020493 | LOC_Os02g09420 | Os02g0187100 | - | Detail |
| C1H2g21026 | 2:4,297,665-4,298,950 | + | C2H2g05469 | CX2g020493 | LOC_Os02g09420 | Os02g0187100 | - | Detail |
| C1H2g18374 | 2:4,305,000-4,306,184 | + | C2H2g03471 | CX2g020493 | LOC_Os02g09420 | Os02g0187100 | - | Detail |
| C1H2g02173 | 2:4,308,153-4,309,423 | + | C2H2g21769 | CX2g020493 | LOC_Os02g09420 | Os02g0187100 | - | Detail |
| C1H2g01303 | 2:4,313,525-4,316,135 | - | C2H2g06811 | CX2g022781 | LOC_Os02g09430 | Os02g0187200 | - | Detail |
| C1H2g06081 | 2:4,321,199-4,325,505 | - | C2H2g24529 | CX2g024261 | LOC_Os02g09450 | Os02g0187400 | OsGDPDL5 | Detail |
| C1H2g08461 | 2:4,328,994-4,331,109 | - | C2H2g14677 | CX2g021982 | LOC_Os02g09460 | Os02g0187500 | - | Detail |
| C1H2g21086 | 2:4,331,797-4,334,867 | + | C2H2g21302 | CX2g023713 | LOC_Os02g09470 | Os02g0187600 | - | Detail |
| C1H2g14518 | 2:4,339,894-4,340,802 | + | C2H2g23054 | CX2g021954 | LOC_Os02g09480 | Os02g0187700 | Os2R_MYB22 | Detail |
| C1H2g11856 | 2:4,342,501-4,346,438 | - | C2H2g26222 | CX2g019349 | LOC_Os02g09490 | Os02g0187800 | - | Detail |
| C1H2g10627 | 2:4,354,714-4,357,750 | - | C2H2g19847 | CX2g020677 | - | - | - | Detail |
| C1H2g20967 | 2:4,359,634-4,361,134 | - | C2H2g19847 | CX2g020677 | - | - | - | Detail |
| C1H2g18832 | 2:4,364,416-4,364,787 | - | C2H2g20536 | CX2g024159 | LOC_Os02g09500 | Os02g0726400 | - | Detail |
| C1H2g07588 | 2:4,375,593-4,377,017 | - | C2H2g26118 | CX2g019937 | LOC_Os02g09510 | Os02g0188000 | OsSGT1 | Detail |
| C1H2g13036 | 2:4,395,685-4,398,144 | - | C2H2g00869 | CX2g020542 | LOC_Os02g09530 | Os02g0188500 | - | Detail |
| C1H2g19971 | 2:4,399,686-4,400,021 | - | C2H2g24211 | CX2g019471 | LOC_Os02g09540 | Os02g0188600 | - | Detail |
| C1H2g09529 | 2:4,407,032-4,408,017 | - | C2H2g13432 | CX2g023837 | LOC_Os02g09590 | Os02g0189000 | - | Detail |
| C1H2g04316 | 2:4,410,320-4,412,338 | - | C2H2g28104 | CX2g021846 | LOC_Os02g09600 | Os02g0189100 | - | Detail |
| C1H2g15662 | 2:4,412,944-4,414,148 | + | C2H2g27990 | CX2g021146 | LOC_Os02g09610 | Os02g0189200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01230 | 3:10,307,365-10,308,510 | + | C1H3g19861 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C2H3g17781 | 3:10,308,593-10,308,889 | - | C1H3g31579 | - | - | - | - | Detail |
| C2H3g10177 | 3:10,316,260-10,322,166 | - | C1H3g05314 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| C2H3g16949 | 3:10,324,466-10,330,856 | - | C1H3g24166 | CX3g027287 | LOC_Os03g20530 | Os03g0321500 | OsBBP1 | Detail |
| C2H3g07472 | 3:10,345,050-10,346,093 | + | C1H3g22188 | CX3g030570 | LOC_Os03g20550 | Os03g0321700 | OsWRKY31, OsWRKY55 | Detail |
| C2H3g22893 | 3:10,347,237-10,347,962 | - | C1H3g31320 | CX3g029278 | LOC_Os03g20560 | Os03g0321800 | - | Detail |
| C2H3g22031 | 3:10,348,238-10,349,180 | + | C1H3g15973 | CX3g025622 | LOC_Os03g20570 | Os03g0321900 | - | Detail |
| C2H3g29406 | 3:10,351,022-10,357,302 | - | C1H3g10139 | CX3g027052 | LOC_Os03g20580 | Os03g0322000 | - | Detail |
| C2H3g13047 | 3:10,357,687-10,358,181 | + | C1H3g01616 | CX3g026700 | LOC_Os03g20590 | - | - | Detail |
| C2H3g25454 | 3:10,358,614-10,358,970 | - | C1H3g09864 | CX3g029175 | LOC_Os03g20600 | Os03g0322200 | - | Detail |
| C2H3g26982 | 3:10,361,368-10,365,986 | + | C1H3g20781 | CX3g026757 | LOC_Os03g20630 | Os03g0322500 | - | Detail |
| C2H3g00494 | 3:10,366,789-10,369,051 | + | C1H3g30541 | CX3g029187 | LOC_Os03g20640 | Os03g0322600 | - | Detail |
| C2H3g22567 | 3:10,369,392-10,372,866 | - | C1H3g17698 | CX3g029676 | LOC_Os03g20650 | Os03g0322700 | - | Detail |
| C2H3g08879 | 3:10,386,065-10,390,118 | + | C1H3g30170 | CX3g029908 | LOC_Os03g20670 | Os03g0322800 | - | Detail |
| C2H3g26182 | 3:10,391,164-10,392,277 | - | C1H3g03964 | CX3g027559 | LOC_Os03g20680 | Os03g0322900 | LEA17, OsLEA17, OsLEA3-2, LEA3-2 | Detail |
| C2H3g25815 | 3:10,397,789-10,403,134 | + | - | CX3g027985 | LOC_Os03g20700 | Os03g0323200 | OsCHLH | Detail |
| C2H3g04983 | 3:10,407,133-10,412,570 | + | C1H3g04844 | CX3g028829 | LOC_Os03g20720 | Os03g0323500 | - | Detail |
| C2H3g18862 | 3:10,413,313-10,413,825 | - | C1H3g01461 | CX3g028214 | LOC_Os03g20730 | Os03g0323600 | - | Detail |
| C2H3g17326 | 3:10,422,832-10,428,321 | + | C1H3g26967 | CX3g025044 | LOC_Os03g20750 | Os03g0323800 | OsVDAC8 | Detail |
| C2H3g13354 | 3:10,433,039-10,434,380 | + | C1H3g06354 | CX3g030983 | LOC_Os03g20760 | Os03g0323900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |