| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00884 | 2:3,812,648-3,816,106 | + | C2H2g11136 | CX2g022017 | LOC_Os02g08260 | Os02g0179100 | - | Detail |
| C1H2g27338 | 2:3,818,986-3,821,778 | - | C2H2g22090 | CX2g024480 | LOC_Os02g08270 | Os02g0179200 | - | Detail |
| C1H2g15683 | 2:3,827,546-3,832,508 | + | C2H2g18129 | CX2g023864 | LOC_Os02g08300 | Os02g0179300 | - | Detail |
| C1H2g09345 | 2:3,832,904-3,835,074 | - | C2H2g12176 | CX2g022399 | LOC_Os02g08310 | Os02g0179400 | - | Detail |
| C1H2g30953 | 2:3,841,510-3,845,473 | + | C2H2g24288 | CX2g020585 | LOC_Os02g08320 | Os02g0179500 | - | Detail |
| C1H2g15298 | 2:3,846,555-3,848,540 | - | - | CX2g020007 | LOC_Os02g08330 | Os02g0179600 | - | Detail |
| C1H2g23751 | 2:3,850,541-3,855,785 | - | C2H2g01634 | CX2g020510 | LOC_Os02g08350 | Os02g0179800 | - | Detail |
| C1H2g17009 | 2:3,857,894-3,866,840 | + | C2H2g05800 | CX2g023636 | LOC_Os02g08360 | Os02g0179900 | - | Detail |
| C1H2g04017 | 2:3,868,337-3,872,818 | + | C2H2g08895 | CX2g019636 | LOC_Os02g08364 | Os02g0180000 | - | Detail |
| C1H2g13865 | 2:3,873,173-3,875,364 | - | C2H2g28931 | CX2g022824 | LOC_Os02g08370 | Os02g0180100 | - | Detail |
| C1H2g02146 | 2:3,877,404-3,880,606 | + | C2H2g25419 | CX2g023398 | LOC_Os02g08380 | Os02g0180200 | LA2, LTA1 | Detail |
| C1H2g01164 | 2:3,896,213-3,897,816 | + | C2H2g28103 | CX2g022601 | LOC_Os02g08400 | Os02g0180400 | HHC2 | Detail |
| C1H2g08033 | 2:3,901,028-3,903,545 | - | C2H2g19969 | CX2g022893 | LOC_Os02g08410 | Os02g0180500 | - | Detail |
| C1H2g12941 | 2:3,907,813-3,910,813 | + | C2H2g21393 | CX2g022487 | LOC_Os02g08420 | Os02g0180700 | OsCCR21 | Detail |
| C1H2g19399 | 2:3,963,157-3,965,142 | + | C2H2g08597 | CX2g020326 | LOC_Os02g08440 | Os02g0181300 | WRKY71, OsWRKY71 | Detail |
| C1H2g31251 | 2:3,977,406-3,978,517 | + | C2H2g13400 | CX2g018962 | LOC_Os02g08470 | Os02g0181700 | - | Detail |
| C1H2g13602 | 2:3,981,671-3,985,149 | + | C2H2g22677 | CX2g021549 | LOC_Os02g08480 | Os02g0181800 | - | Detail |
| C1H2g14304 | 2:3,986,063-3,991,419 | - | C2H2g06559 | CX2g021572 | LOC_Os02g08490 | Os02g0181900 | - | Detail |
| C1H2g19533 | 2:3,992,506-3,997,145 | - | C2H2g18423 | CX2g020537 | LOC_Os02g08500 | Os02g0182100 | RR24, OsRR24, Rrb2, Orr4, OsRR17, OsRRB2, DLC1 | Detail |
| C1H2g06188 | 2:4,014,849-4,015,442 | - | C2H2g14863 | CX2g019859 | LOC_Os02g08510 | Os02g0182300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g26580 | 6:9,344,593-9,356,616 | - | C1H6g02861 | CX6g043920 | LOC_Os06g19640 | Os06g0300600 | - | Detail |
| C2H6g03142 | 6:9,360,094-9,365,482 | + | C1H6g26999 | CX6g045766 | LOC_Os06g19650 | Os06g0300700 | - | Detail |
| C2H6g00260 | 6:9,370,259-9,378,930 | + | C1H6g02079 | CX6g043735 | LOC_Os06g19660 | Os06g0300800 | - | Detail |
| C2H6g11264 | 6:9,391,399-9,396,839 | - | C1H6g04702 | CX6g043851 | LOC_Os06g19680 | Os06g0301000 | MAL, OsMAL | Detail |
| C2H6g15269 | 6:9,399,278-9,404,508 | - | C1H6g17786 | CX6g044892 | LOC_Os06g19690 | Os06g0301100 | - | Detail |
| C2H6g20000 | 6:9,422,926-9,440,180 | + | C1H6g16427 | CX6g043357 | LOC_Os06g19730 | Os06g0301300 | - | Detail |
| C2H6g13299 | 6:9,441,961-9,444,890 | - | C1H6g20576 | CX6g044935 | LOC_Os06g19740 | Os06g0301400 | - | Detail |
| C2H6g05182 | 6:9,451,213-9,454,141 | - | C1H6g09002 | CX6g042800 | LOC_Os06g19740 | Os06g0301400 | - | Detail |
| C2H6g26080 | 6:9,469,672-9,470,096 | - | C1H3g31784 | CX6g044596 | - | - | - | Detail |
| C2H6g25869 | 6:9,478,447-9,486,233 | + | C1H6g06926 | CX6g042957 | LOC_Os06g19800 | Os06g0302000 | - | Detail |
| C2H6g30287 | 6:9,525,498-9,542,417 | + | C1H6g23546 | CX6g043293 | LOC_Os06g19960 | Os06g0303400 | - | Detail |
| C2H6g19345 | 6:9,551,091-9,552,239 | + | C1H6g18924 | CX6g043277 | LOC_Os06g19980 | Os06g0303700 | - | Detail |
| C2H6g10205 | 6:9,559,873-9,562,238 | + | C1H6g02136 | CX6g041533 | LOC_Os06g19990 | Os06g0303800 | - | Detail |
| C2H6g00381 | 6:9,578,356-9,579,175 | - | C1H6g14279 | CX6g045366 | - | Os06g0304300 | - | Detail |
| C2H6g02144 | 6:9,583,471-9,584,951 | + | C1H6g02911 | CX6g041211 | LOC_Os06g20030 | Os06g0304500 | - | Detail |
| C2H6g22125 | 6:9,587,981-9,595,265 | - | C1H6g16451 | CX6g041237 | LOC_Os06g20040 | Os06g0304600 | - | Detail |
| C2H6g23839 | 6:9,600,333-9,604,148 | + | C1H6g06658 | CX6g042326 | LOC_Os06g20050 | Os06g0304700 | - | Detail |
| C2H6g11429 | 6:9,619,173-9,629,417 | + | C1H6g08869 | CX6g041532 | LOC_Os06g20090 | Os06g0305200 | - | Detail |
| C2H6g14592 | 6:9,635,182-9,636,678 | + | C1H6g11013 | CX6g042324 | LOC_Os06g20110 | Os06g0305400 | - | Detail |
| C2H6g07528 | 6:9,638,122-9,640,300 | + | C1H6g06042 | CX6g042324 | LOC_Os06g20120 | Os06g0305400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |