| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00884 | 2:3,812,648-3,816,106 | + | C2H2g11136 | CX2g022017 | LOC_Os02g08260 | Os02g0179100 | - | Detail |
| C1H2g27338 | 2:3,818,986-3,821,778 | - | C2H2g22090 | CX2g024480 | LOC_Os02g08270 | Os02g0179200 | - | Detail |
| C1H2g15683 | 2:3,827,546-3,832,508 | + | C2H2g18129 | CX2g023864 | LOC_Os02g08300 | Os02g0179300 | - | Detail |
| C1H2g09345 | 2:3,832,904-3,835,074 | - | C2H2g12176 | CX2g022399 | LOC_Os02g08310 | Os02g0179400 | - | Detail |
| C1H2g30953 | 2:3,841,510-3,845,473 | + | C2H2g24288 | CX2g020585 | LOC_Os02g08320 | Os02g0179500 | - | Detail |
| C1H2g15298 | 2:3,846,555-3,848,540 | - | - | CX2g020007 | LOC_Os02g08330 | Os02g0179600 | - | Detail |
| C1H2g23751 | 2:3,850,541-3,855,785 | - | C2H2g01634 | CX2g020510 | LOC_Os02g08350 | Os02g0179800 | - | Detail |
| C1H2g17009 | 2:3,857,894-3,866,840 | + | C2H2g05800 | CX2g023636 | LOC_Os02g08360 | Os02g0179900 | - | Detail |
| C1H2g04017 | 2:3,868,337-3,872,818 | + | C2H2g08895 | CX2g019636 | LOC_Os02g08364 | Os02g0180000 | - | Detail |
| C1H2g13865 | 2:3,873,173-3,875,364 | - | C2H2g28931 | CX2g022824 | LOC_Os02g08370 | Os02g0180100 | - | Detail |
| C1H2g02146 | 2:3,877,404-3,880,606 | + | C2H2g25419 | CX2g023398 | LOC_Os02g08380 | Os02g0180200 | LA2, LTA1 | Detail |
| C1H2g01164 | 2:3,896,213-3,897,816 | + | C2H2g28103 | CX2g022601 | LOC_Os02g08400 | Os02g0180400 | HHC2 | Detail |
| C1H2g08033 | 2:3,901,028-3,903,545 | - | C2H2g19969 | CX2g022893 | LOC_Os02g08410 | Os02g0180500 | - | Detail |
| C1H2g12941 | 2:3,907,813-3,910,813 | + | C2H2g21393 | CX2g022487 | LOC_Os02g08420 | Os02g0180700 | OsCCR21 | Detail |
| C1H2g19399 | 2:3,963,157-3,965,142 | + | C2H2g08597 | CX2g020326 | LOC_Os02g08440 | Os02g0181300 | WRKY71, OsWRKY71 | Detail |
| C1H2g31251 | 2:3,977,406-3,978,517 | + | C2H2g13400 | CX2g018962 | LOC_Os02g08470 | Os02g0181700 | - | Detail |
| C1H2g13602 | 2:3,981,671-3,985,149 | + | C2H2g22677 | CX2g021549 | LOC_Os02g08480 | Os02g0181800 | - | Detail |
| C1H2g14304 | 2:3,986,063-3,991,419 | - | C2H2g06559 | CX2g021572 | LOC_Os02g08490 | Os02g0181900 | - | Detail |
| C1H2g19533 | 2:3,992,506-3,997,145 | - | C2H2g18423 | CX2g020537 | LOC_Os02g08500 | Os02g0182100 | RR24, OsRR24, Rrb2, Orr4, OsRR17, OsRRB2, DLC1 | Detail |
| C1H2g06188 | 2:4,014,849-4,015,442 | - | C2H2g14863 | CX2g019859 | LOC_Os02g08510 | Os02g0182300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g20802 | 5:23,472,912-23,478,409 | + | C1H5g10966 | CX5g039766 | LOC_Os05g48870 | Os05g0563400 | - | Detail |
| C2H5g27189 | 5:23,479,138-23,481,400 | - | C1H5g01496 | CX5g037148 | LOC_Os05g48880 | Os05g0563500 | OsMMS21 | Detail |
| C2H5g22988 | 5:23,485,417-23,486,172 | + | C1H5g19054 | CX5g036766 | LOC_Os05g48890 | Os05g0563550 | - | Detail |
| C2H5g26586 | 5:23,489,590-23,490,411 | + | C1H5g24831 | CX5g036692 | LOC_Os05g48900 | Os05g0563600 | - | Detail |
| C2H5g19965 | 5:23,499,747-23,500,148 | + | C1H5g28795 | CX1g003489 | LOC_Os05g48930 | Os05g0149950 | - | Detail |
| C2H5g30565 | 5:23,504,742-23,508,394 | - | C1H5g01891 | CX5g038036 | LOC_Os05g48940 | Os05g0564000 | - | Detail |
| C2H5g09559 | 5:23,509,285-23,509,959 | + | C1H5g27525 | - | LOC_Os05g48950 | Os05g0564100 | - | Detail |
| C2H5g04888 | 5:23,517,033-23,517,950 | + | C1H5g29642 | CX5g040225 | LOC_Os05g48960 | Os05g0564200 | - | Detail |
| C2H5g15150 | 5:23,521,012-23,528,164 | + | C1H5g01424 | CX5g038798 | LOC_Os05g48970 | Os05g0564300 | - | Detail |
| C2H5g16098 | 5:23,527,299-23,527,848 | - | - | CX5g037380 | - | Os05g0564350 | - | Detail |
| C2H5g21685 | 5:23,528,580-23,530,326 | - | C1H5g14301 | CX5g039483 | LOC_Os05g48980 | Os05g0564400 | - | Detail |
| C2H5g04875 | 5:23,538,356-23,543,422 | + | C1H5g26322 | CX5g036954 | LOC_Os05g48990 | Os05g0564500 | DWL2, OsWOX9D | Detail |
| C2H5g03360 | 5:23,545,936-23,547,070 | - | C1H5g22284 | CX5g040209 | LOC_Os05g49010 | Os05g0564700 | - | Detail |
| C2H5g08970 | 5:23,549,797-23,551,655 | + | C1H5g11743 | CX5g037646 | LOC_Os05g49020 | Os05g0564800 | - | Detail |
| C2H5g20403 | 5:23,552,159-23,554,313 | + | C1H5g09043 | CX5g037646 | LOC_Os05g49030 | Os05g0565000 | - | Detail |
| C2H5g24526 | 5:23,557,080-23,558,981 | + | C1H5g09274 | CX5g038379 | LOC_Os05g49040 | Os05g0565100 | - | Detail |
| C2H5g06163 | 5:23,559,206-23,561,861 | + | C1H5g19442 | CX5g040804 | LOC_Os05g49050 | Os05g0565200 | - | Detail |
| C2H5g13806 | 5:23,565,042-23,566,967 | - | C1H5g17900 | CX5g038249 | - | - | - | Detail |
| C2H5g19958 | 5:23,568,518-23,571,366 | - | C1H5g08734 | CX5g039855 | LOC_Os05g49060 | Os05g0565400 | - | Detail |
| C2H5g07466 | 5:23,572,155-23,573,093 | - | C1H5g23266 | CX5g040924 | LOC_Os05g49070 | Os05g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |