| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10513 | 2:3,627,729-3,641,029 | - | C2H2g16155 | CX2g023980 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| C1H2g25148 | 2:3,655,457-3,658,188 | - | C2H2g22723 | CX2g022339 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| C1H2g16100 | 2:3,675,161-3,678,689 | + | C2H2g01390 | CX2g022848 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| C1H2g15920 | 2:3,688,213-3,692,183 | - | C2H2g10970 | CX2g024774 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| C1H2g27198 | 2:3,693,389-3,695,014 | - | C2H2g24704 | CX2g020793 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| C1H2g08951 | 2:3,702,511-3,707,829 | + | C2H2g12631 | CX2g022957 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |
| C1H2g09011 | 2:3,709,197-3,710,984 | - | C2H2g27738 | CX2g022286 | LOC_Os02g08110 | Os02g0177700 | - | Detail |
| C1H2g27287 | 2:3,719,476-3,725,246 | - | C2H2g12927 | CX2g022124 | LOC_Os02g08120 | Os02g0177800 | - | Detail |
| C1H2g28459 | 2:3,728,441-3,733,246 | + | C2H2g07746 | CX2g019995 | LOC_Os02g08130 | Os02g0177900 | - | Detail |
| C1H2g30647 | 2:3,733,199-3,736,414 | - | C2H2g14463 | CX2g024854 | LOC_Os02g08140 | Os02g0178000 | - | Detail |
| C1H2g28373 | 2:3,742,231-3,743,496 | + | C2H2g17770 | CX2g023396 | LOC_Os02g08150 | Os02g0178100 | - | Detail |
| C1H2g21750 | 2:3,745,477-3,748,847 | + | C2H2g04824 | CX2g020766 | LOC_Os02g08160 | Os02g0178200 | - | Detail |
| C1H2g10276 | 2:3,753,302-3,753,910 | - | - | CX2g023860 | LOC_Os02g08170 | Os02g0191800 | - | Detail |
| C1H2g28628 | 2:3,759,285-3,761,367 | + | C2H2g23387 | CX2g023441 | LOC_Os02g08180 | Os02g0178400 | - | Detail |
| C1H2g01304 | 2:3,761,581-3,765,201 | - | C2H2g26582 | CX2g023345 | LOC_Os02g08190 | Os02g0178500 | - | Detail |
| C1H2g06394 | 2:3,768,804-3,769,322 | - | C2H2g18111 | CX2g022788 | LOC_Os02g08200 | Os02g0178600 | - | Detail |
| C1H2g21156 | 2:3,774,769-3,777,303 | + | C2H2g20296 | CX2g022199 | LOC_Os02g06310 | - | - | Detail |
| C1H2g04350 | 2:3,780,500-3,781,253 | + | C2H2g23988 | CX2g021716 | LOC_Os02g08220 | Os02g0178700 | OsbHLH157 | Detail |
| C1H2g14635 | 2:3,782,484-3,790,170 | - | C2H2g27041 | CX2g019198 | LOC_Os02g08230 | Os02g0178800 | OsGL1-2 | Detail |
| C1H2g16007 | 2:3,805,226-3,810,355 | + | C2H2g11136 | CX2g019069 | LOC_Os02g08240 | Os02g0179000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03888 | 4:28,295,410-28,295,805 | - | C1H4g29756 | CX4g033466 | LOC_Os04g55170 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C2H4g28358 | 4:28,299,164-28,310,153 | - | C1H4g08012 | CX4g036449 | LOC_Os04g55190 | Os04g0644675 | - | Detail |
| C2H4g15694 | 4:28,314,152-28,316,257 | + | C1H4g06360 | CX4g033425 | LOC_Os04g55200 | Os04g0644700 | - | Detail |
| C2H4g05660 | 4:28,317,215-28,322,007 | + | C1H4g02968 | CX4g032169 | LOC_Os04g55210 | Os04g0644800 | - | Detail |
| C2H4g12779 | 4:28,327,588-28,332,623 | + | C1H4g08695 | CX4g032248 | LOC_Os04g55220 | Os04g0644900 | - | Detail |
| C2H4g19510 | 4:28,335,294-28,348,459 | + | C1H4g06283 | CX4g033214 | LOC_Os04g55230 | Os04g0645100 | - | Detail |
| C2H4g14418 | 4:28,351,996-28,352,583 | - | C1H4g18694 | CX4g032908 | LOC_Os04g55240 | Os04g0645200 | - | Detail |
| C2H4g22066 | 4:28,355,865-28,356,620 | + | - | CX4g031778 | LOC_Os04g55250 | Os04g0645500 | - | Detail |
| C2H4g01093 | 4:28,356,757-28,360,600 | - | C1H4g06884 | CX4g036437 | LOC_Os04g55260 | Os04g0645600 | - | Detail |
| C2H4g27076 | 4:28,366,816-28,370,143 | - | C1H4g28592 | CX4g032085 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| C2H4g00324 | 4:28,370,940-28,372,339 | - | C1H4g12666 | CX4g031654 | LOC_Os04g55290 | Os04g0646100 | - | Detail |
| C2H4g28891 | 4:28,404,351-28,405,010 | - | C1H4g04933 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C2H4g25523 | 4:28,405,169-28,407,565 | - | C1H4g01013 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C2H4g00723 | 4:28,428,202-28,432,244 | - | C1H4g17955 | CX4g032705 | LOC_Os04g55410 | Os04g0647800 | - | Detail |
| C2H4g03628 | 4:28,435,119-28,438,284 | + | C1H4g25822 | CX4g034505 | LOC_Os04g55420 | Os04g0647900 | - | Detail |
| C2H4g20686 | 4:28,441,751-28,444,579 | + | C1H4g16013 | CX4g034215 | LOC_Os04g55440 | Os04g0648200 | - | Detail |
| C2H4g26419 | 4:28,449,270-28,454,054 | - | C1H4g25119 | CX4g031467 | LOC_Os04g55480 | Os04g0648500 | - | Detail |
| C2H4g12403 | 4:28,455,832-28,456,650 | + | - | CX4g034038 | LOC_Os04g55490 | Os04g0648600 | - | Detail |
| C2H4g12616 | 4:28,459,506-28,465,690 | + | C1H4g03048 | CX4g032703 | LOC_Os04g55500 | Os04g0648700 | - | Detail |
| C2H4g21483 | 4:28,474,766-28,480,256 | + | C1H4g02593 | CX4g033088 | LOC_Os04g55510 | Os04g0648800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |