| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g30476 | 2:3,465,296-3,473,007 | + | C2H2g15147 | CX2g022443 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| C1H2g17525 | 2:3,478,496-3,480,754 | - | C2H2g30059 | CX2g021568 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| C1H2g14780 | 2:3,492,229-3,495,883 | + | C2H2g18280 | CX2g018842 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| C1H2g13947 | 2:3,496,711-3,499,911 | - | - | - | - | - | - | Detail |
| C1H2g30350 | 2:3,501,163-3,503,692 | + | C2H2g20308 | CX2g022416 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| C1H2g08878 | 2:3,504,574-3,507,307 | + | C2H2g01221 | CX2g024880 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| C1H2g02250 | 2:3,514,273-3,516,367 | + | C2H2g00728 | CX2g023598 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| C1H2g14484 | 2:3,521,827-3,524,013 | + | C2H2g16638 | CX2g023627 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| C1H2g18593 | 2:3,529,747-3,532,788 | + | C2H2g09018 | CX2g020712 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |
| C1H2g09443 | 2:3,533,246-3,534,196 | - | C2H2g04831 | CX2g023186 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| C1H2g13410 | 2:3,534,241-3,536,187 | - | C2H2g04831 | CX2g023186 | LOC_Os02g07850 | Os02g0175301 | - | Detail |
| C1H2g02033 | 2:3,540,536-3,548,235 | + | C2H2g15931 | CX2g019528 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| C1H2g00289 | 2:3,549,838-3,554,924 | + | C2H2g01720 | CX2g019472 | LOC_Os02g07880 | Os02g0175500 | - | Detail |
| C1H2g00014 | 2:3,559,221-3,559,667 | + | - | CX2g023543 | LOC_Os02g07890 | Os02g0175600 | - | Detail |
| C1H2g07080 | 2:3,560,479-3,564,291 | - | C2H2g23705 | CX2g019494 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| C1H2g29388 | 2:3,565,548-3,565,832 | + | C2H2g17525 | CX2g023593 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| C1H2g08053 | 2:3,568,737-3,571,399 | - | C2H2g13326 | CX2g020425 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| C1H2g09013 | 2:3,576,888-3,577,556 | - | C2H2g12429 | CX2g024012 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| C1H2g28078 | 2:3,594,417-3,604,769 | - | C2H2g10282 | CX2g024713 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| C1H2g25304 | 2:3,615,387-3,616,415 | - | C2H2g27167 | CX2g023070 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g00265 | 11:16,017,977-16,018,242 | + | C1H11g04694 | - | - | - | - | Detail |
| C2H11g03682 | 11:16,019,282-16,020,371 | + | C1H11g22326 | CX11g013108 | LOC_Os11g30910 | Os11g0505300 | STV11, OsSOT1 | Detail |
| C2H11g12950 | 11:16,055,498-16,056,635 | - | C1H11g18981 | CX11g012904 | - | - | - | Detail |
| C2H11g07707 | 11:16,058,802-16,062,787 | - | C1H11g04733 | CX11g013034 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| C2H11g24452 | 11:16,083,324-16,085,813 | - | C1H11g01433 | CX11g011882 | - | - | - | Detail |
| C2H11g19133 | 11:16,101,966-16,104,538 | + | C1H11g28049 | CX11g014596 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| C2H11g00051 | 11:16,106,403-16,112,480 | - | C1H11g02002 | CX11g011414 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| C2H11g25408 | 11:16,116,383-16,122,093 | - | C1H11g16532 | CX11g014983 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| C2H11g13604 | 11:16,175,027-16,183,838 | + | C1H11g15164 | CX11g012879 | - | - | - | Detail |
| C2H11g14886 | 11:16,212,809-16,215,231 | - | C1H11g17370 | CX11g014845 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| C2H11g10237 | 11:16,225,735-16,229,982 | - | C1H11g16566 | - | - | - | - | Detail |
| C2H11g01178 | 11:16,265,929-16,267,830 | + | C1H11g06724 | CX11g013912 | LOC_Os11g31330 | Os11g0512000 | ONAC025, SS1, SS1/ ONAC025 | Detail |
| C2H11g11640 | 11:16,271,802-16,273,910 | + | C1H11g14895 | CX11g013912 | LOC_Os11g31340 | Os11g0512100 | ONAC127 | Detail |
| C2H11g24382 | 11:16,278,637-16,280,896 | + | C1H11g00143 | CX11g012563 | LOC_Os11g31360 | Os11g0512200 | - | Detail |
| C2H11g26741 | 11:16,289,112-16,291,043 | + | C1H11g30952 | CX11g012563 | LOC_Os11g31380 | Os11g0512600 | ONAC129 | Detail |
| C2H11g02622 | 11:16,298,647-16,298,982 | + | C1H11g16256 | CX11g011889 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| C2H11g28267 | 11:16,341,430-16,350,415 | - | C1H11g13788 | - | LOC_Os11g31480 | Os11g0514000 | stvb-j, Stvb-i, ST07i | Detail |
| C2H11g17850 | 11:16,353,764-16,355,586 | - | C1H11g31406 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g12230 | 11:16,373,799-16,375,853 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g06164 | 11:16,376,216-16,378,142 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |