| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15991 | 2:3,199,232-3,201,157 | - | C2H2g19465 | CX2g019496 | LOC_Os02g07160 | Os02g0168100 | OsHPPD | Detail |
| C1H2g12427 | 2:3,204,214-3,204,806 | - | C2H2g21644 | CX2g021826 | LOC_Os02g07170 | Os02g0168200 | - | Detail |
| C1H2g27005 | 2:3,209,293-3,212,188 | + | C2H2g14957 | CX2g022739 | LOC_Os02g07180 | Os02g0168300 | - | Detail |
| C1H2g17697 | 2:3,216,393-3,221,516 | + | C2H2g15308 | CX2g023861 | LOC_Os02g07190 | Os02g0168400 | - | Detail |
| C1H2g15097 | 2:3,224,870-3,226,195 | + | C2H2g27598 | CX2g019993 | LOC_Os02g07200 | Os02g0168500 | - | Detail |
| C1H2g02992 | 2:3,227,323-3,229,979 | - | C2H2g30613 | CX2g020274 | LOC_Os02g07210 | Os02g0168600 | - | Detail |
| C1H2g24249 | 2:3,232,760-3,234,675 | - | C2H2g22535 | CX2g022989 | LOC_Os02g07220 | Os02g0168700 | - | Detail |
| C1H2g16743 | 2:3,235,605-3,238,520 | + | C2H2g29143 | CX2g019641 | LOC_Os02g07230 | Os02g0168800 | - | Detail |
| C1H2g05199 | 2:3,239,066-3,240,376 | - | C2H2g05298 | CX2g023253 | LOC_Os02g07240 | Os02g0168900 | - | Detail |
| C1H2g08763 | 2:3,241,208-3,244,905 | - | C2H2g28592 | CX2g023357 | LOC_Os02g07250 | Os02g0169000 | - | Detail |
| C1H2g16238 | 2:3,248,057-3,251,828 | + | C2H2g19444 | CX2g020247 | LOC_Os02g07260 | Os02g0169300 | - | Detail |
| C1H2g08697 | 2:3,259,911-3,268,968 | - | C2H2g02121 | CX2g023065 | LOC_Os02g07310 | Os02g0169400 | OsAGO17 | Detail |
| C1H2g13885 | 2:3,281,863-3,285,555 | + | C2H2g06608 | CX6g043108 | LOC_Os02g07330 | Os02g0169700 | - | Detail |
| C1H2g04805 | 2:3,287,984-3,301,446 | + | C2H2g01264 | CX2g022837 | LOC_Os02g07340 | Os02g0169800 | - | Detail |
| C1H2g14236 | 2:3,302,407-3,306,269 | - | C2H2g22477 | CX2g022025 | LOC_Os02g07350 | Os02g0169900 | - | Detail |
| C1H2g12408 | 2:3,307,268-3,312,967 | + | C2H2g09938 | CX2g019659 | LOC_Os02g07360 | Os02g0565400 | - | Detail |
| C1H2g30375 | 2:3,313,142-3,314,918 | + | C2H2g21866 | CX6g043108 | LOC_Os02g07410 | Os02g0170100 | - | Detail |
| C1H2g28383 | 2:3,315,776-3,317,326 | - | C2H2g02927 | - | LOC_Os02g07420 | Os02g0170200 | - | Detail |
| C1H2g02120 | 2:3,319,591-3,320,354 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| C1H2g03281 | 2:3,323,144-3,323,712 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20996 | 4:30,225,879-30,227,521 | - | C1H4g05282 | CX4g034879 | LOC_Os04g58710 | Os04g0683700 | OsAAE3 | Detail |
| C2H4g00697 | 4:30,232,390-30,237,758 | + | C1H4g17079 | CX4g033496 | LOC_Os04g58720 | Os04g0683800 | OsFTIP6 | Detail |
| C2H4g01840 | 4:30,237,886-30,240,588 | - | C1H4g07968 | CX4g032610 | LOC_Os04g58730 | Os04g0683900 | - | Detail |
| C2H4g26858 | 4:30,256,940-30,263,782 | + | C1H4g20128 | CX4g033459 | LOC_Os04g58750 | Os04g0684200 | OsBSK3 | Detail |
| C2H4g01802 | 4:30,264,613-30,265,466 | + | C1H4g02282 | CX4g033405 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| C2H4g02516 | 4:30,268,563-30,279,634 | + | C1H4g18219 | CX4g031834 | LOC_Os04g58780 | Os04g0684500 | - | Detail |
| C2H4g13202 | 4:30,280,251-30,280,496 | + | - | CX4g033329 | LOC_Os04g58790 | Os04g0684600 | - | Detail |
| C2H4g22761 | 4:30,283,690-30,285,252 | + | C1H4g26669 | CX4g033643 | LOC_Os04g58800 | Os04g0684800 | - | Detail |
| C2H4g01080 | 4:30,288,522-30,289,517 | + | - | CX4g034684 | LOC_Os04g58810 | Os04g0684900 | OsCAF1B, OsCAF1B(L), OsCAF1-5 | Detail |
| C2H4g29352 | 4:30,296,915-30,297,646 | + | - | CX4g032372 | LOC_Os04g58820 | Os04g0685000 | - | Detail |
| C2H4g17883 | 4:30,300,119-30,302,518 | - | C1H4g14195 | CX4g035667 | LOC_Os04g58830 | Os04g0685100 | - | Detail |
| C2H4g29963 | 4:30,304,800-30,306,281 | + | - | CX4g035231 | LOC_Os04g58840 | Os04g0685200 | - | Detail |
| C2H4g08586 | 4:30,310,521-30,311,138 | - | C1H4g00056 | CX4g035928 | LOC_Os04g58850 | Os04g0685300 | OsHin1 | Detail |
| C2H4g17212 | 4:30,315,783-30,316,445 | - | - | CX4g035805 | LOC_Os04g58860 | Os04g0685400 | - | Detail |
| C2H4g10173 | 4:30,321,505-30,324,811 | - | C1H4g22677 | CX4g034074 | LOC_Os04g58870 | Os04g0685500 | - | Detail |
| C2H4g09863 | 4:30,328,518-30,334,739 | - | C1H4g12841 | CX4g034074 | LOC_Os04g58880 | Os04g0685600 | OsEXO70A1, RLS2 | Detail |
| C2H4g05485 | 4:30,338,214-30,339,059 | - | - | CX4g035539 | LOC_Os04g58890 | Os04g0685700 | - | Detail |
| C2H4g05284 | 4:30,341,417-30,344,361 | + | C1H4g24643 | CX4g035298 | LOC_Os04g58900 | Os04g0685800 | - | Detail |
| C2H4g20145 | 4:30,346,745-30,350,657 | - | C1H4g30748 | CX4g033134 | LOC_Os04g58910 | Os04g0685900 | - | Detail |
| C2H4g20450 | 4:30,359,547-30,360,785 | - | - | - | LOC_Os04g58920 | Os04g0686000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |