| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15991 | 2:3,199,232-3,201,157 | - | C2H2g19465 | CX2g019496 | LOC_Os02g07160 | Os02g0168100 | OsHPPD | Detail |
| C1H2g12427 | 2:3,204,214-3,204,806 | - | C2H2g21644 | CX2g021826 | LOC_Os02g07170 | Os02g0168200 | - | Detail |
| C1H2g27005 | 2:3,209,293-3,212,188 | + | C2H2g14957 | CX2g022739 | LOC_Os02g07180 | Os02g0168300 | - | Detail |
| C1H2g17697 | 2:3,216,393-3,221,516 | + | C2H2g15308 | CX2g023861 | LOC_Os02g07190 | Os02g0168400 | - | Detail |
| C1H2g15097 | 2:3,224,870-3,226,195 | + | C2H2g27598 | CX2g019993 | LOC_Os02g07200 | Os02g0168500 | - | Detail |
| C1H2g02992 | 2:3,227,323-3,229,979 | - | C2H2g30613 | CX2g020274 | LOC_Os02g07210 | Os02g0168600 | - | Detail |
| C1H2g24249 | 2:3,232,760-3,234,675 | - | C2H2g22535 | CX2g022989 | LOC_Os02g07220 | Os02g0168700 | - | Detail |
| C1H2g16743 | 2:3,235,605-3,238,520 | + | C2H2g29143 | CX2g019641 | LOC_Os02g07230 | Os02g0168800 | - | Detail |
| C1H2g05199 | 2:3,239,066-3,240,376 | - | C2H2g05298 | CX2g023253 | LOC_Os02g07240 | Os02g0168900 | - | Detail |
| C1H2g08763 | 2:3,241,208-3,244,905 | - | C2H2g28592 | CX2g023357 | LOC_Os02g07250 | Os02g0169000 | - | Detail |
| C1H2g16238 | 2:3,248,057-3,251,828 | + | C2H2g19444 | CX2g020247 | LOC_Os02g07260 | Os02g0169300 | - | Detail |
| C1H2g08697 | 2:3,259,911-3,268,968 | - | C2H2g02121 | CX2g023065 | LOC_Os02g07310 | Os02g0169400 | OsAGO17 | Detail |
| C1H2g13885 | 2:3,281,863-3,285,555 | + | C2H2g06608 | CX6g043108 | LOC_Os02g07330 | Os02g0169700 | - | Detail |
| C1H2g04805 | 2:3,287,984-3,301,446 | + | C2H2g01264 | CX2g022837 | LOC_Os02g07340 | Os02g0169800 | - | Detail |
| C1H2g14236 | 2:3,302,407-3,306,269 | - | C2H2g22477 | CX2g022025 | LOC_Os02g07350 | Os02g0169900 | - | Detail |
| C1H2g12408 | 2:3,307,268-3,312,967 | + | C2H2g09938 | CX2g019659 | LOC_Os02g07360 | Os02g0565400 | - | Detail |
| C1H2g30375 | 2:3,313,142-3,314,918 | + | C2H2g21866 | CX6g043108 | LOC_Os02g07410 | Os02g0170100 | - | Detail |
| C1H2g28383 | 2:3,315,776-3,317,326 | - | C2H2g02927 | - | LOC_Os02g07420 | Os02g0170200 | - | Detail |
| C1H2g02120 | 2:3,319,591-3,320,354 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| C1H2g03281 | 2:3,323,144-3,323,712 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10310 | 3:10,894,128-10,896,740 | + | C1H3g27306 | CX3g030007 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| C2H3g17481 | 3:10,896,805-10,900,686 | - | C1H3g15898 | CX3g028069 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| C2H3g22879 | 3:10,904,923-10,906,403 | - | C1H3g21366 | CX3g029311 | LOC_Os11g11390 | Os03g0332500 | - | Detail |
| C2H3g01804 | 3:10,908,596-10,910,611 | - | C1H3g21148 | CX3g027147 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| C2H3g10583 | 3:10,913,454-10,917,924 | - | C1H3g11764 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C2H3g24190 | 3:10,924,413-10,929,402 | + | C1H3g02450 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C2H3g30311 | 3:10,929,734-10,935,090 | - | C1H3g13994 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C2H3g26938 | 3:10,935,271-10,945,526 | + | C1H3g12459 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C2H3g19269 | 3:10,946,787-10,949,471 | + | C1H3g29664 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C2H3g24047 | 3:10,953,705-10,958,206 | + | C1H3g30788 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C2H3g24886 | 3:10,958,751-10,959,254 | + | C1H3g06087 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C2H3g01911 | 3:10,962,059-10,966,029 | - | C1H3g12764 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C2H3g06072 | 3:10,971,787-10,975,855 | + | C1H3g24732 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C2H3g19486 | 3:10,977,888-10,981,311 | + | C1H3g12242 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C2H3g01471 | 3:10,981,968-10,982,447 | - | C1H3g12872 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C2H3g23114 | 3:10,988,613-10,995,631 | + | C1H3g04089 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C2H3g29675 | 3:10,995,715-11,000,869 | - | C1H3g19863 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C2H3g22866 | 3:11,003,512-11,004,783 | + | C1H3g05344 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C2H3g03886 | 3:11,009,746-11,011,541 | + | C1H3g04080 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C2H3g08004 | 3:11,015,360-11,015,605 | + | C1H3g16339 | CX3g030092 | - | Os07g0676800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |