| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29020 | 2:2,983,838-2,987,891 | + | C2H2g02325 | CX2g020211 | LOC_Os02g06840 | Os02g0164300 | - | Detail |
| C1H2g05801 | 2:2,988,629-2,989,015 | + | - | CX2g024303 | LOC_Os02g06850 | Os02g0164400 | - | Detail |
| C1H2g26363 | 2:2,991,045-2,992,478 | + | C2H2g03881 | CX2g020340 | LOC_Os02g06880 | Os02g0164600 | - | Detail |
| C1H2g28782 | 2:2,995,822-3,000,056 | + | C2H2g20227 | - | - | - | - | Detail |
| C1H2g28915 | 2:3,000,909-3,004,314 | + | C2H2g15390 | CX2g019807 | LOC_Os02g06890 | Os02g0164800 | - | Detail |
| C1H2g10142 | 2:3,020,962-3,027,137 | + | C2H2g08844 | CX2g021570 | LOC_Os02g06910 | Os02g0164900 | - | Detail |
| C1H2g17118 | 2:3,029,148-3,034,407 | - | C2H2g20692 | CX2g021601 | LOC_Os02g06920 | Os02g0165000 | - | Detail |
| C1H2g01650 | 2:3,038,690-3,041,240 | + | C2H2g16079 | CX2g019152 | LOC_Os02g06930 | Os02g0165100 | - | Detail |
| C1H2g25497 | 2:3,071,213-3,072,418 | + | - | CX2g023265 | LOC_Os02g06960 | Os02g0165500 | - | Detail |
| C1H2g09523 | 2:3,077,157-3,077,474 | + | - | CX2g020036 | LOC_Os02g06970 | Os02g0165800 | - | Detail |
| C1H2g17090 | 2:3,086,899-3,087,102 | + | - | CX2g024460 | - | Os02g0166501 | - | Detail |
| C1H2g26908 | 2:3,116,308-3,117,114 | + | C2H2g27172 | CX2g020929 | LOC_Os02g07030 | Os02g0166800 | OsG1L1 | Detail |
| C1H2g23632 | 2:3,128,859-3,132,260 | + | C2H2g27607 | CX2g024294 | LOC_Os02g07040 | Os02g0167000 | - | Detail |
| C1H2g16723 | 2:3,133,206-3,135,820 | + | C2H2g29468 | CX2g019411 | LOC_Os02g07044 | Os02g0167100 | - | Detail |
| C1H2g08635 | 2:3,136,812-3,139,223 | - | C2H2g15470 | CX2g024870 | LOC_Os02g07050 | Os02g0167200 | SOP10 | Detail |
| C1H2g27502 | 2:3,142,094-3,145,016 | + | C2H2g18240 | CX2g022042 | LOC_Os02g07060 | Os02g0167300 | - | Detail |
| C1H2g31793 | 2:3,146,220-3,154,078 | - | C2H2g24332 | CX2g021350 | LOC_Os02g07070 | Os02g0167500 | LowAC1 | Detail |
| C1H2g24765 | 2:3,178,439-3,178,810 | + | C2H2g21001 | CX2g022899 | LOC_Os02g07110 | Os02g0445100 | - | Detail |
| C1H2g25293 | 2:3,182,675-3,192,671 | - | C2H2g11696 | CX2g021417 | LOC_Os02g07120 | Os02g0167700 | OsCAND1 | Detail |
| C1H2g26186 | 2:3,197,574-3,198,347 | + | - | CX2g018859 | LOC_Os02g07150 | Os02g0168000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29211 | 5:24,773,434-24,778,298 | - | C1H5g20997 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C2H5g25800 | 5:24,781,493-24,782,926 | - | C1H5g28104 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C2H5g28633 | 5:24,788,568-24,789,401 | - | C1H5g28669 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C2H5g27012 | 5:24,791,474-24,795,427 | - | C1H5g07980 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C2H5g24138 | 5:24,807,669-24,813,399 | - | C1H5g15566 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C2H5g08909 | 5:24,821,276-24,829,119 | + | C1H5g26110 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C2H5g25499 | 5:24,830,313-24,834,947 | - | C1H5g09316 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| C2H5g10034 | 5:24,834,804-24,835,256 | + | - | - | - | - | - | Detail |
| C2H5g15674 | 5:24,835,328-24,836,809 | + | C1H5g23946 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C2H5g18619 | 5:24,837,143-24,837,715 | - | C1H5g07547 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C2H5g04566 | 5:24,847,706-24,851,120 | + | C1H5g22966 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C2H5g00689 | 5:24,855,205-24,879,340 | + | C1H5g29705 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C2H5g03425 | 5:24,855,293-24,856,027 | - | C1H5g17200 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C2H5g25216 | 5:24,879,621-24,882,457 | - | C1H5g10995 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C2H5g14814 | 5:24,883,294-24,885,392 | - | C1H5g27674 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C2H5g08054 | 5:24,889,439-24,889,771 | + | C1H6g06805 | CX5g039789 | - | Os05g0429100 | - | Detail |
| C2H5g23094 | 5:24,890,282-24,894,145 | - | C1H5g24835 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C2H5g15029 | 5:24,896,984-24,897,528 | - | C1H5g11204 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g10878 | 5:24,898,710-24,900,326 | + | C1H5g19628 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C2H5g03677 | 5:24,902,561-24,903,473 | - | C1H5g15344 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |