| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09236 | 1:8,195,800-8,197,582 | - | C2H1g20399 | CX1g001340 | LOC_Os01g16210 | Os01g0267400 | - | Detail |
| C1H1g04981 | 1:8,198,743-8,201,822 | - | C2H1g06019 | CX1g005681 | LOC_Os01g16220 | Os01g0267600 | OsSUN2 | Detail |
| C1H1g28491 | 1:8,216,722-8,219,777 | - | C2H1g16329 | CX1g005936 | LOC_Os01g16240 | Os01g0267900 | OsCam1-3, OsCaM1 | Detail |
| C1H1g11390 | 1:8,223,083-8,230,280 | - | C2H1g07724 | CX1g002499 | LOC_Os01g16260 | Os01g0268100 | - | Detail |
| C1H1g25952 | 1:8,237,281-8,249,395 | + | C2H1g05687 | CX1g003116 | LOC_Os01g16290 | Os01g0268300 | - | Detail |
| C1H1g18249 | 1:8,263,475-8,270,876 | + | C2H1g29340 | CX1g002549 | LOC_Os01g16310 | Os01g0268600 | - | Detail |
| C1H1g26462 | 1:8,271,766-8,272,707 | - | C2H1g26364 | CX1g002307 | LOC_Os01g16320 | Os01g0268700 | - | Detail |
| C1H1g22656 | 1:8,276,743-8,281,899 | + | C2H1g07376 | CX1g005043 | LOC_Os01g16330 | Os01g0268800 | - | Detail |
| C1H1g05590 | 1:8,282,663-8,285,748 | + | C2H1g15881 | CX1g006980 | LOC_Os01g16340 | Os01g0268900 | - | Detail |
| C1H1g03305 | 1:8,286,287-8,296,680 | - | C2H1g26690 | CX1g002921 | LOC_Os01g16350 | Os01g0269100 | - | Detail |
| C1H1g18111 | 1:8,344,138-8,347,511 | - | C2H1g25069 | CX1g006578 | LOC_Os01g16414 | Os01g0269900 | OsARP6 | Detail |
| C1H1g03213 | 1:8,370,604-8,374,729 | - | C2H1g28351 | CX1g001230 | LOC_Os01g16430 | Os01g0270100 | - | Detail |
| C1H1g30414 | 1:8,384,408-8,386,588 | + | C2H1g10510 | CX1g002719 | LOC_Os01g16450 | Os01g0270300 | - | Detail |
| C1H1g20616 | 1:8,393,910-8,395,397 | + | C2H1g29197 | CX1g003971 | LOC_Os01g16470 | Os01g0270700 | - | Detail |
| C1H1g12376 | 1:8,398,917-8,401,448 | + | C2H1g23269 | CX1g005256 | LOC_Os01g16510 | Os01g0271000 | - | Detail |
| C1H1g15294 | 1:8,401,835-8,406,329 | - | C2H1g13171 | CX1g001075 | LOC_Os01g16520 | Os01g0271200 | OsGluRS | Detail |
| C1H1g14438 | 1:8,407,283-8,411,275 | - | C2H1g23197 | CX1g002800 | LOC_Os01g16530 | Os01g0271400 | - | Detail |
| C1H1g27124 | 1:8,413,355-8,417,644 | + | C2H1g08814 | CX1g005031 | LOC_Os01g16540 | Os01g0271500 | - | Detail |
| C1H1g12818 | 1:8,424,103-8,426,572 | - | C2H1g05634 | CX1g005496 | LOC_Os01g16550 | Os01g0271700 | - | Detail |
| C1H1g19269 | 1:8,427,063-8,427,617 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05108 | 3:4,707,270-4,710,116 | + | C1H3g14289 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C2H3g04674 | 3:4,711,100-4,713,323 | - | C1H3g07517 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| C2H3g27684 | 3:4,714,151-4,716,867 | + | C1H3g08866 | CX3g025008 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| C2H3g15317 | 3:4,716,730-4,720,061 | - | C1H3g26823 | CX3g027908 | LOC_Os03g10469 | Os03g0201800 | - | Detail |
| C2H3g07444 | 3:4,720,624-4,725,054 | - | C1H3g22443 | CX3g027908 | LOC_Os03g10478 | Os03g0201901 | - | Detail |
| C2H3g09161 | 3:4,730,604-4,734,181 | - | C1H3g14443 | CX3g028036 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| C2H3g24025 | 3:4,736,414-4,740,022 | - | C1H3g22113 | CX3g026152 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| C2H3g13194 | 3:4,741,051-4,745,017 | - | C1H3g27837 | CX3g030169 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| C2H3g17561 | 3:4,746,437-4,749,472 | - | C1H3g27666 | CX3g025689 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| C2H3g21513 | 3:4,752,859-4,759,444 | + | C1H3g27625 | CX3g029844 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| C2H3g08169 | 3:4,771,694-4,772,873 | + | C1H3g03653 | CX3g027943 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| C2H3g27974 | 3:4,783,031-4,789,961 | + | C1H3g22146 | CX3g027605 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| C2H3g08201 | 3:4,792,026-4,793,503 | - | C1H3g29891 | CX3g028482 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| C2H3g30001 | 3:4,812,950-4,817,305 | + | C1H3g06442 | CX3g026677 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| C2H3g23547 | 3:4,820,796-4,821,985 | + | C1H3g30369 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g15767 | 3:4,829,271-4,829,690 | - | C1H3g08546 | - | LOC_Os03g10710 | Os03g0204500 | - | Detail |
| C2H3g08384 | 3:4,832,991-4,834,679 | + | C1H3g00980 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g07827 | 3:4,838,784-4,841,678 | + | C1H3g16112 | CX3g030767 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| C2H3g15453 | 3:4,842,534-4,842,952 | - | C1H3g05329 | - | LOC_Os03g10740 | Os03g0204900 | - | Detail |
| C2H3g17885 | 3:4,844,672-4,850,468 | - | C1H3g13244 | CX3g028803 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |