| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g04797 | 2:2,371,052-2,372,459 | + | C2H2g26407 | CX2g022702 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| C1H2g24189 | 2:2,377,204-2,377,692 | + | - | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C1H2g28291 | 2:2,377,825-2,382,243 | + | C2H2g19048 | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C1H2g25609 | 2:2,384,625-2,386,619 | - | C2H2g14296 | CX2g022700 | LOC_Os02g05620 | Os02g0149700 | - | Detail |
| C1H2g12792 | 2:2,392,731-2,395,897 | + | C2H2g28510 | CX2g021786 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| C1H2g24221 | 2:2,408,225-2,409,461 | + | C2H2g30382 | CX2g022836 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| C1H2g30137 | 2:2,411,223-2,413,719 | - | C2H2g12819 | CX2g019305 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| C1H2g14077 | 2:2,416,951-2,420,488 | - | C2H2g16453 | CX2g019747 | LOC_Os02g05660 | Os02g0150100 | - | Detail |
| C1H2g22203 | 2:2,426,227-2,428,977 | + | C2H2g10679 | - | LOC_Os02g05680 | Os02g0150300 | - | Detail |
| C1H2g04684 | 2:2,430,157-2,434,578 | + | C2H2g28552 | CX2g018988 | LOC_Os02g05686 | Os02g0597300 | - | Detail |
| C1H2g09613 | 2:2,438,514-2,438,879 | - | - | - | - | - | - | Detail |
| C1H2g03887 | 2:2,439,651-2,444,774 | + | C2H2g28552 | CX2g018988 | LOC_Os02g05686 | Os02g0150600 | - | Detail |
| C1H2g03457 | 2:2,449,606-2,453,796 | + | C2H2g02218 | CX2g020416 | LOC_Os02g05692 | Os02g0150700 | OsDHSRP1 | Detail |
| C1H2g10911 | 2:2,456,898-2,461,541 | + | C2H2g02918 | CX2g021275 | LOC_Os02g05700 | Os02g0150800 | OsZTL1 | Detail |
| C1H2g16735 | 2:2,462,170-2,465,153 | - | C2H2g19150 | CX2g022629 | LOC_Os02g05710 | Os02g0150900 | - | Detail |
| C1H2g05305 | 2:2,469,693-2,474,151 | + | C2H2g13140 | CX2g024081 | LOC_Os02g05720 | Os02g0680500 | - | Detail |
| C1H2g13403 | 2:2,469,726-2,474,498 | - | - | - | - | - | - | Detail |
| C1H2g10714 | 2:2,474,511-2,480,376 | - | C2H2g10999 | CX2g021128 | LOC_Os02g05730 | Os02g0151100 | - | Detail |
| C1H2g03046 | 2:2,482,126-2,487,968 | - | C2H2g14489 | CX2g019402 | LOC_Os02g05744 | Os02g0151300 | - | Detail |
| C1H2g11128 | 2:2,499,278-2,505,280 | + | C2H2g24062 | CX2g020856 | LOC_Os02g05770 | Os02g0151400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08416 | 1:27,925,685-27,929,922 | + | C1H1g06199 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C2H1g22814 | 1:27,930,437-27,931,290 | + | C1H1g21519 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C2H1g20660 | 1:27,932,265-27,934,722 | + | C1H1g06931 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C2H1g21635 | 1:27,935,519-27,937,890 | + | C1H1g02075 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C2H1g02265 | 1:27,938,809-27,941,059 | + | C1H1g00896 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C2H1g14114 | 1:27,942,037-27,946,129 | - | C1H1g09179 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C2H1g10922 | 1:27,965,504-27,970,673 | + | C1H1g19262 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C2H1g29233 | 1:27,974,220-27,977,908 | + | C1H1g17809 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C2H1g09211 | 1:27,980,401-27,982,082 | - | C1H1g24495 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g25863 | 1:27,992,124-27,997,821 | + | C1H1g00277 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| C2H1g29243 | 1:28,006,149-28,009,921 | - | C1H1g12537 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C2H1g03544 | 1:28,014,717-28,018,126 | - | C1H1g02730 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C2H1g05225 | 1:28,029,339-28,029,912 | - | C1H1g08638 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C2H1g04914 | 1:28,043,850-28,051,886 | + | C1H1g18828 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C2H1g10063 | 1:28,056,456-28,059,326 | - | C1H1g01340 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C2H1g08663 | 1:28,061,852-28,063,890 | + | C1H1g28508 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C2H1g27818 | 1:28,064,022-28,068,139 | - | C1H1g19975 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C2H1g21432 | 1:28,070,490-28,072,113 | - | C1H1g04449 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C2H1g04122 | 1:28,073,615-28,076,043 | - | C1H1g25368 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C2H1g02082 | 1:28,080,846-28,086,760 | - | C1H1g06182 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |