| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24459 | 2:1,495,230-1,498,367 | + | C2H2g01875 | CX2g022118 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| C1H2g13894 | 2:1,501,498-1,508,193 | - | C2H2g19732 | CX2g019313 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| C1H2g25126 | 2:1,513,815-1,514,207 | - | - | CX2g023899 | - | - | - | Detail |
| C1H2g29540 | 2:1,518,426-1,518,683 | + | - | CX2g022522 | LOC_Os02g03880 | Os02g0131600 | - | Detail |
| C1H2g05041 | 2:1,519,692-1,523,049 | - | C2H2g21277 | CX2g020563 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| C1H2g18848 | 2:1,524,789-1,528,602 | - | C2H2g13835 | CX2g019095 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| C1H2g00924 | 2:1,532,795-1,537,571 | - | C2H2g22540 | CX2g019802 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| C1H2g01456 | 2:1,538,000-1,541,517 | - | C2H2g12575 | CX2g018957 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| C1H2g17223 | 2:1,546,073-1,548,934 | + | C2H2g02428 | CX2g021626 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| C1H2g04467 | 2:1,560,120-1,560,732 | - | C2H2g10653 | CX2g021994 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| C1H2g04799 | 2:1,572,574-1,581,526 | - | C2H2g24972 | CX2g024093 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| C1H2g29927 | 2:1,597,014-1,599,940 | - | C2H2g13962 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C1H2g20335 | 2:1,603,995-1,607,745 | - | C2H2g19617 | CX2g022112 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| C1H2g27472 | 2:1,613,761-1,618,866 | + | C2H2g07026 | CX2g024675 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| C1H2g25242 | 2:1,619,453-1,623,665 | - | C2H2g19264 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C1H2g02951 | 2:1,624,793-1,634,812 | - | C2H2g26953 | CX2g024350 | LOC_Os02g04040 | Os02g0133300 | - | Detail |
| C1H2g30829 | 2:1,636,601-1,637,041 | - | C2H2g26953 | CX2g024350 | LOC_Os02g04060 | Os02g0133300 | - | Detail |
| C1H2g18206 | 2:1,638,458-1,646,512 | - | C2H2g26953 | CX2g019521 | LOC_Os02g04080 | Os02g0133400 | - | Detail |
| C1H2g21252 | 2:1,647,027-1,647,830 | - | C2H2g26953 | CX2g019521 | LOC_Os02g04090 | - | - | Detail |
| C1H2g25852 | 2:1,650,271-1,653,694 | + | C2H2g03692 | CX2g021792 | LOC_Os02g04100 | Os02g0133800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g12076 | 3:25,756,000-25,758,037 | + | C1H3g07329 | CX3g025970 | LOC_Os03g49450 | Os03g0701300 | - | Detail |
| C2H3g02417 | 3:25,759,525-25,761,882 | + | C1H3g07329 | CX3g026197 | LOC_Os03g49464 | Os03g0701400 | - | Detail |
| C2H3g02951 | 3:25,764,459-25,765,572 | + | C1H3g30968 | CX3g026197 | - | - | - | Detail |
| C2H3g12750 | 3:25,773,588-25,775,986 | - | C1H3g23591 | CX3g027768 | LOC_Os03g49490 | Os03g0701600 | - | Detail |
| C2H3g06305 | 3:25,777,901-25,782,322 | - | C1H3g03877 | CX3g028834 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| C2H3g14249 | 3:25,787,836-25,794,330 | + | C1H3g05492 | CX3g030270 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| C2H3g17325 | 3:25,794,481-25,798,522 | - | C1H3g29237 | CX3g025317 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| C2H3g13892 | 3:25,808,187-25,809,661 | - | C1H3g26019 | CX3g029512 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| C2H3g03163 | 3:25,814,227-25,815,645 | + | C1H3g02000 | CX3g030273 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| C2H3g18085 | 3:25,833,328-25,838,086 | + | C1H3g01842 | CX3g029283 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| C2H3g29993 | 3:25,843,604-25,844,257 | - | C1H3g13716 | CX3g025714 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| C2H3g11714 | 3:25,844,556-25,849,098 | - | C1H3g15421 | CX3g027255 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| C2H3g22582 | 3:25,851,998-25,857,278 | - | C1H3g29071 | CX3g027190 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| C2H3g04815 | 3:25,857,718-25,863,088 | - | C1H3g29286 | CX3g028984 | LOC_Os03g49620 | Os03g0703200 | TMS10L | Detail |
| C2H3g29194 | 3:25,863,993-25,870,294 | - | C1H3g20716 | CX3g026534 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| C2H3g01101 | 3:25,872,696-25,878,901 | - | C1H3g05428 | CX3g027729 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| C2H3g22172 | 3:25,885,794-25,886,414 | + | C1H3g02932 | CX3g031175 | - | Os03g0703600 | - | Detail |
| C2H3g01738 | 3:25,889,627-25,890,489 | - | - | CX3g024968 | LOC_Os03g49680 | - | - | Detail |
| C2H3g29973 | 3:25,894,402-25,897,031 | + | C1H3g27763 | CX3g028108 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| C2H3g13190 | 3:25,898,221-25,899,845 | + | C1H3g27362 | CX3g026571 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |