| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g27511 | 2:1,338,316-1,344,726 | - | C2H2g19035 | CX2g023102 | LOC_Os02g03590 | Os02g0128300 | - | Detail |
| C1H2g31001 | 2:1,345,725-1,348,958 | - | C2H2g10942 | CX2g019971 | LOC_Os02g03600 | Os02g0128400 | - | Detail |
| C1H2g09741 | 2:1,351,137-1,354,641 | + | C2H2g08901 | CX2g023955 | LOC_Os02g03610 | Os02g0128600 | - | Detail |
| C1H2g19043 | 2:1,355,647-1,359,421 | - | C2H2g14950 | CX2g021109 | LOC_Os02g03620 | Os02g0128800 | - | Detail |
| C1H2g04872 | 2:1,392,319-1,396,177 | - | C2H2g11508 | CX2g019908 | LOC_Os02g03670 | Os02g0129300 | - | Detail |
| C1H2g06915 | 2:1,400,258-1,401,254 | + | C2H2g22850 | CX2g023477 | LOC_Os02g03690 | Os02g0129600 | - | Detail |
| C1H2g12890 | 2:1,404,366-1,407,762 | + | C2H2g08858 | CX2g019008 | LOC_Os02g03690 | Os02g0129600 | - | Detail |
| C1H2g03291 | 2:1,419,043-1,419,351 | - | - | CX2g023401 | LOC_Os02g03710 | Os02g0129800 | - | Detail |
| C1H2g28637 | 2:1,421,707-1,423,982 | + | C2H2g23553 | CX2g021920 | LOC_Os02g03720 | Os02g0129900 | - | Detail |
| C1H2g08180 | 2:1,424,806-1,426,380 | - | C2H2g07241 | CX2g021945 | LOC_Os02g03730 | Os02g0130000 | - | Detail |
| C1H2g21442 | 2:1,427,180-1,430,583 | - | C2H2g20449 | CX2g019963 | LOC_Os02g03740 | Os02g0130100 | - | Detail |
| C1H2g31656 | 2:1,431,036-1,434,808 | - | C2H2g28878 | CX2g023071 | LOC_Os02g03750 | Os02g0130200 | - | Detail |
| C1H2g25825 | 2:1,435,955-1,439,260 | - | C2H2g01607 | CX2g020059 | LOC_Os02g03760 | Os02g0130300 | - | Detail |
| C1H2g05190 | 2:1,452,441-1,456,125 | + | C2H2g07812 | CX2g024486 | LOC_Os02g03790 | Os02g0130600 | - | Detail |
| C1H2g04662 | 2:1,457,776-1,458,539 | + | C2H2g07812 | CX2g019011 | LOC_Os02g03800 | Os02g0130700 | - | Detail |
| C1H2g22701 | 2:1,459,234-1,460,313 | - | C2H2g24840 | CX2g023931 | LOC_Os02g03810 | Os02g0130800 | - | Detail |
| C1H2g15224 | 2:1,460,580-1,464,449 | + | C2H2g02495 | CX2g024589 | LOC_Os02g03820 | Os02g0130900 | - | Detail |
| C1H2g09748 | 2:1,468,203-1,468,619 | - | - | CX2g023117 | LOC_Os02g03830 | Os02g0131000 | - | Detail |
| C1H2g22468 | 2:1,474,452-1,487,409 | + | C2H2g19848 | CX2g021664 | LOC_Os02g03840 | Os02g0131100 | - | Detail |
| C1H2g15765 | 2:1,488,910-1,493,365 | - | C2H2g29791 | CX2g022294 | LOC_Os02g03850 | Os02g0131200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g07424 | 9:19,218,434-19,222,530 | + | C1H9g13374 | CX9g057785 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| C2H9g05946 | 9:19,224,305-19,225,510 | + | C1H9g26902 | CX9g055093 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| C2H9g19055 | 9:19,229,128-19,230,339 | + | C1H9g23958 | CX9g057620 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| C2H9g15395 | 9:19,231,647-19,237,669 | - | C1H9g25655 | CX9g056260 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| C2H9g06176 | 9:19,245,063-19,247,290 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g22038 | 9:19,251,638-19,252,552 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g09064 | 9:19,256,964-19,263,700 | - | C1H9g21987 | CX9g056096 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| C2H9g08732 | 9:19,265,273-19,266,640 | - | C1H9g31128 | CX9g056096 | LOC_Os09g39350 | Os09g0567000 | - | Detail |
| C2H9g17992 | 9:19,273,423-19,277,358 | + | C1H9g04890 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C2H9g25680 | 9:19,277,859-19,280,562 | + | C1H9g13266 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C2H9g00653 | 9:19,282,863-19,285,337 | + | C1H9g16090 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C2H9g10548 | 9:19,289,359-19,295,560 | + | C1H9g25909 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C2H9g15634 | 9:19,296,740-19,301,777 | + | C1H9g01897 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C2H9g07527 | 9:19,301,792-19,305,375 | - | C1H9g27590 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C2H9g28844 | 9:19,309,307-19,311,969 | - | C1H9g04610 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C2H9g14034 | 9:19,314,286-19,318,425 | + | C1H9g06631 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C2H9g07303 | 9:19,319,765-19,321,171 | + | C1H9g18800 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C2H9g14146 | 9:19,321,995-19,323,316 | - | C1H9g25533 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C2H9g28333 | 9:19,333,286-19,334,722 | - | C1H9g27100 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C2H9g03364 | 9:19,334,994-19,336,916 | + | C1H9g30656 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |