| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g25885 | 2:511,212-511,736 | + | C2H2g09423 | CX2g023145 | - | Os02g0144300 | - | Detail |
| C1H2g28737 | 2:512,219-528,456 | - | C2H2g11436 | CX2g020170 | LOC_Os02g02050 | Os02g0110700 | - | Detail |
| C1H2g23635 | 2:534,022-539,607 | + | C2H2g03291 | - | - | - | - | Detail |
| C1H2g03642 | 2:542,529-550,508 | + | C2H2g28219 | CX2g024805 | LOC_Os02g02110 | - | - | Detail |
| C1H2g03397 | 2:547,047-550,223 | - | C2H2g25923 | CX2g023278 | LOC_Os02g02120 | Os02g0111600 | OsWAK11 | Detail |
| C1H2g11275 | 2:551,548-553,597 | + | C2H2g00106 | CX2g022213 | LOC_Os02g02130 | Os02g0111700 | - | Detail |
| C1H2g19068 | 2:557,087-560,215 | - | C2H2g09655 | CX2g021036 | LOC_Os02g02140 | Os02g0111800 | - | Detail |
| C1H2g08619 | 2:566,450-569,233 | + | C2H2g07259 | CX2g020132 | LOC_Os02g02150 | Os02g0111900 | - | Detail |
| C1H2g30533 | 2:570,769-571,595 | - | C2H2g15382 | CX2g024174 | LOC_Os02g02160 | Os02g0112000 | - | Detail |
| C1H2g03728 | 2:574,795-576,396 | + | - | CX2g024535 | LOC_Os02g02190 | Os02g0112600 | NRT2.2, OsNRT2.2, OsNRT2.1 | Detail |
| C1H2g31025 | 2:586,167-587,768 | - | - | CX2g024535 | LOC_Os02g02190 | Os02g0112100 | NRT2.1, OsNRT2.1, OsNRT2.2 | Detail |
| C1H2g07735 | 2:591,979-603,893 | - | C2H2g17743 | CX2g019924 | LOC_Os02g02210 | Os02g0112900 | OsGABA-T | Detail |
| C1H2g27463 | 2:619,875-623,681 | + | C2H2g20495 | CX2g023815 | LOC_Os02g02230 | Os02g0113200 | - | Detail |
| C1H2g00775 | 2:625,195-626,864 | + | C2H2g03042 | CX2g022139 | LOC_Os02g02270 | Os02g0113800 | - | Detail |
| C1H2g15227 | 2:627,487-628,048 | + | C2H2g10635 | - | - | - | - | Detail |
| C1H2g19532 | 2:628,835-639,667 | - | C2H2g25057 | CX2g019365 | LOC_Os02g02290 | Os02g0114000 | OsBRM | Detail |
| C1H2g15650 | 2:643,748-645,076 | - | C2H2g11144 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g07896 | 2:645,154-645,375 | - | C2H2g30135 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g30436 | 2:648,161-652,853 | - | C2H2g25462 | CX2g024695 | LOC_Os02g02320 | Os02g0114200 | - | Detail |
| C1H2g22369 | 2:655,775-656,005 | + | - | CX2g023221 | LOC_Os02g02330 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g19863 | 10:19,473,110-19,473,292 | - | - | - | - | - | - | Detail |
| C2H10g07027 | 10:19,473,461-19,473,940 | + | - | - | LOC_Os10g40070 | Os10g0548400 | - | Detail |
| C2H10g14464 | 10:19,477,800-19,479,258 | + | C1H10g27524 | CX10g008369 | LOC_Os10g40090 | Os10g0548600 | - | Detail |
| C2H10g16316 | 10:19,480,360-19,485,156 | - | C1H10g05554 | CX10g007574 | LOC_Os10g40100 | Os10g0548700 | - | Detail |
| C2H10g12578 | 10:19,486,224-19,489,938 | - | C1H10g10175 | - | LOC_Os10g40110 | Os10g0548800 | - | Detail |
| C2H10g30436 | 10:19,491,718-19,494,120 | - | C1H10g07317 | CX10g010244 | LOC_Os10g40120 | Os10g0548850 | - | Detail |
| C2H10g24935 | 10:19,494,833-19,498,422 | - | C1H10g02818 | CX10g007624 | LOC_Os10g40130 | Os10g0548900 | - | Detail |
| C2H10g15635 | 10:19,506,298-19,508,634 | - | C1H10g25097 | CX10g007422 | LOC_Os10g40140 | Os10g0549100 | - | Detail |
| C2H10g26239 | 10:19,516,710-19,520,822 | + | C1H10g30455 | CX10g008655 | LOC_Os10g40200 | Os10g0549500 | OsBCAT5 | Detail |
| C2H10g20282 | 10:19,522,488-19,524,289 | + | C1H10g21707 | CX10g008565 | LOC_Os10g40220 | Os10g0549700 | - | Detail |
| C2H10g01231 | 10:19,535,177-19,536,970 | + | C1H10g21822 | CX10g008565 | LOC_Os10g40230 | Os10g0549700 | - | Detail |
| C2H10g09682 | 10:19,537,854-19,539,805 | + | C1H10g15021 | CX10g008565 | LOC_Os10g40230 | Os10g0549700 | - | Detail |
| C2H10g11784 | 10:19,548,399-19,553,648 | + | C1H10g02907 | CX10g009870 | LOC_Os10g40250 | Os10g0550000 | - | Detail |
| C2H10g23125 | 10:19,559,390-19,568,840 | + | C1H10g22570 | CX10g008803 | LOC_Os10g40260 | Os10g0550066 | - | Detail |
| C2H10g28528 | 10:19,574,997-19,575,811 | + | C1H10g22570 | CX10g008803 | LOC_Os10g40260 | Os10g0550100 | - | Detail |
| C2H10g15244 | 10:19,578,823-19,580,782 | + | C1H10g10567 | CX10g010649 | - | Os10g0550200 | - | Detail |
| C2H10g20131 | 10:19,581,608-19,584,192 | - | C1H10g01126 | CX10g009376 | LOC_Os10g40270 | Os10g0550300 | - | Detail |
| C2H10g02071 | 10:19,587,368-19,587,814 | + | - | CX10g009085 | - | - | - | Detail |
| C2H10g16976 | 10:19,590,985-19,592,172 | + | - | CX10g008766 | LOC_Os10g40280 | Os10g0550400 | - | Detail |
| C2H10g27936 | 10:19,592,442-19,597,899 | - | C1H10g31565 | CX10g008577 | LOC_Os10g40290 | Os10g0550500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |