| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g14256 | 2:297,949-298,688 | - | C2H2g29873 | - | - | Os02g0601300 | - | Detail |
| C1H2g11350 | 2:300,952-303,938 | + | C2H2g25519 | CX2g019294 | LOC_Os02g01520 | Os02g0105500 | - | Detail |
| C1H2g25324 | 2:306,100-308,737 | - | C2H2g13554 | CX2g023790 | LOC_Os02g01550 | Os02g0105800 | - | Detail |
| C1H2g24054 | 2:309,859-310,421 | - | C2H2g03705 | - | - | - | - | Detail |
| C1H2g12279 | 2:310,451-312,778 | - | C2H2g04904 | CX2g022675 | LOC_Os02g01560 | Os02g0105900 | - | Detail |
| C1H2g27715 | 2:323,479-327,376 | + | C2H2g14375 | CX2g024828 | LOC_Os02g01590 | Os02g0106100 | OsVIN2, SGS1 | Detail |
| C1H2g21988 | 2:334,401-336,656 | - | C2H2g17711 | CX2g019998 | LOC_Os02g01610 | Os02g0106300 | - | Detail |
| C1H2g27101 | 2:339,597-340,157 | - | C2H2g07056 | CX2g023425 | LOC_Os02g01700 | Os02g0106600 | - | Detail |
| C1H2g12415 | 2:344,917-353,164 | + | C2H2g29220 | CX2g021724 | LOC_Os02g01710 | Os02g0106700 | - | Detail |
| C1H2g31700 | 2:356,691-361,381 | + | C2H2g28107 | CX2g019834 | LOC_Os02g01720 | Os02g0106800 | - | Detail |
| C1H2g27373 | 2:362,178-364,337 | - | C2H2g03800 | CX2g019638 | LOC_Os02g01730 | Os02g0106900 | - | Detail |
| C1H2g28224 | 2:369,161-377,240 | + | C2H2g07259 | CX2g024029 | LOC_Os02g01740 | Os02g0107000 | - | Detail |
| C1H2g11305 | 2:378,143-379,331 | - | - | CX2g024741 | LOC_Os02g01750 | - | - | Detail |
| C1H2g01388 | 2:380,440-383,314 | + | C2H2g06927 | CX2g020261 | LOC_Os02g01760 | Os02g0107200 | - | Detail |
| C1H2g24556 | 2:386,187-387,335 | - | C2H2g00247 | CX2g024227 | LOC_Os02g01790 | Os02g0107600 | - | Detail |
| C1H2g11466 | 2:393,931-397,469 | + | C2H2g20623 | CX2g024551 | LOC_Os02g01800 | Os02g0107700 | - | Detail |
| C1H2g28236 | 2:400,590-401,331 | - | C2H2g07723 | - | LOC_Os02g01810 | Os02g0107800 | - | Detail |
| C1H2g30849 | 2:402,966-406,280 | - | C2H2g18805 | CX2g024881 | LOC_Os02g01820 | Os02g0107900 | - | Detail |
| C1H2g15653 | 2:411,095-411,721 | - | C2H2g24315 | - | LOC_Os02g01830 | Os02g0108000 | - | Detail |
| C1H2g27642 | 2:412,429-412,719 | - | C2H2g10455 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09624 | 1:30,787,077-30,788,245 | - | C1H1g00772 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C2H1g09286 | 1:30,799,473-30,816,246 | - | C1H1g15712 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C2H1g26961 | 1:30,828,310-30,834,847 | - | C1H1g15897 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C2H1g04146 | 1:30,837,506-30,842,632 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C2H1g13967 | 1:30,844,373-30,844,582 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60070 | Os01g0816600 | - | Detail |
| C2H1g24791 | 1:30,845,806-30,847,272 | + | C1H1g24642 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g25178 | 1:30,847,362-30,847,664 | + | C1H1g24879 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g12383 | 1:30,852,593-30,855,794 | - | C1H1g23182 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C2H1g27536 | 1:30,858,990-30,862,426 | - | C1H1g20937 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C2H1g05301 | 1:30,867,420-30,870,525 | + | C1H1g16273 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C2H1g04044 | 1:30,871,690-30,872,622 | - | C1H1g15906 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C2H1g17170 | 1:30,884,562-30,888,327 | + | C1H1g14583 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C2H1g22450 | 1:30,888,779-30,892,097 | - | C1H1g28961 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C2H1g03576 | 1:30,903,588-30,907,758 | + | C1H1g28985 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C2H1g16399 | 1:30,911,405-30,912,871 | + | C1H1g10378 | CX1g005236 | - | Os01g0818100 | - | Detail |
| C2H1g17192 | 1:30,922,297-30,925,172 | + | C1H1g09654 | CX1g002636 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| C2H1g08644 | 1:30,931,215-30,934,712 | + | C1H1g30151 | CX1g003042 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| C2H1g07956 | 1:30,936,955-30,947,811 | - | C1H1g03453 | CX1g000179 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| C2H1g13182 | 1:30,953,125-30,956,828 | - | - | - | LOC_Os01g60290 | Os01g0818900 | - | Detail |
| C2H1g24195 | 1:30,956,541-30,960,942 | + | C1H1g23393 | CX1g001508 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |